RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 NFATC1O95644 943 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 CALB1P05937 261 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 HNRNPH3P31942 346 aaKnown RBP14.98□□□□□ -0.01
LIG1-208ENST00000595758 MLLT6P55198 1093 aaPredicted RBP14.98□□□□□ -0.01
LIG1-208ENST00000595758 RNASE9P60153 205 aaKnown RBP14.98□□□□□ -0.01
LIG1-208ENST00000595758 CDK17Q00537 523 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 PTP4A2Q12974 167 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 NR1H3Q13133 447 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 TRIP4Q15650 581 aaPredicted RBP14.98□□□□□ -0.01
LIG1-208ENST00000595758 PPP1R2P3Q6NXS1 205 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 TPRG1Q6ZUI0 275 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 VPS36Q86VN1 386 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 BBS7Q8IWZ6 715 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 ADGRG2Q8IZP9 1017 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 OLIG1Q8TAK6 271 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 ADAM32Q8TC27 787 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 PBXIP1Q96AQ6 731 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 C8orf33Q9H7E9 229 aaPredicted RBP14.98□□□□□ -0.01
LIG1-208ENST00000595758 ECT2Q9H8V3 914 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 ZNHIT6Q9NWK9 470 aaKnown RBP14.98□□□□□ -0.01
LIG1-208ENST00000595758 WDR35Q9P2L0 1181 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 ZNF510Q9Y2H8 683 aa14.98□□□□□ -0.01
LIG1-208ENST00000595758 F5P12259 2224 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 OTOL1A6NHN0 477 aaPredicted RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 TMCO5BA8MYB1 307 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 STK25O00506 426 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 MAN2B1O00754 1011 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 GPR37L1O60883 481 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 DAB1O75553 588 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 PDGFBP01127 241 aaPredicted RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 KLKB1P03952 638 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 GZMAP12544 262 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 CORO1AP31146 461 aaKnown RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 SOX9P48436 509 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 HARS2P49590 506 aaKnown RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 TBX4P57082 545 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 STARD6P59095 220 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 TBX2Q13207 712 aaPredicted RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 TMEM31Q5JXX7 168 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 ZNF852Q6ZMS4 543 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 Q6ZNB5 142 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 MON1BQ7L1V2 547 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 PHLDB2Q86SQ0 1253 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 TAC4Q86UU9 113 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 RALGPS2Q86X27 583 aaPredicted RBP14.97□□□□□ -0.01
LIG1-208ENST00000595758 DRC7Q8IY82 874 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 SERPINB11Q96P15 392 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 DNAJC7Q99615 494 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-208ENST00000595758 TBC1D17Q9HA65 648 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 C11orf16Q9NQ32 467 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 TAS2R14Q9NYV8 317 aa14.97□□□□□ -0.01
LIG1-208ENST00000595758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-208ENST00000595758 AKR1B15C9JRZ8 316 aaPredicted RBP14.96□□□□□ -0.01
LIG1-208ENST00000595758 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 MFAP3LO75121 409 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 TRUB2O95900 331 aaKnown RBP14.96□□□□□ -0.01
LIG1-208ENST00000595758 ADH1CP00326 375 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 CYP17A1P05093 508 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 PLEKP08567 350 aaPredicted RBP14.96□□□□□ -0.01
LIG1-208ENST00000595758 NOS2P35228 1153 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 MATKP42679 507 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 ADKP55263 362 aaKnown RBP14.96□□□□□ -0.01
LIG1-208ENST00000595758 AMPD2Q01433 879 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 RING1Q06587 406 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 NNTQ13423 1086 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 ARID5BQ14865 1188 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 DHCR24Q15392 516 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 RHBDF2Q6PJF5 856 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 BMP8AQ7Z5Y6 402 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 DENND1CQ8IV53 801 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 CNGA4Q8IV77 575 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 MCOLN2Q8IZK6 566 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 FLCNQ8NFG4 579 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 MSANTD3Q96H12 275 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 DDX23Q9BUQ8 820 aaKnown RBP14.96□□□□□ -0.01
LIG1-208ENST00000595758 FAM204AQ9H8W3 233 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 RRN3Q9NYV6 651 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 ADAMTS1Q9UHI8 967 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 TMEM59LQ9UK28 342 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 AGO1Q9UL18 857 aaKnown RBP14.96□□□□□ -0.01
LIG1-208ENST00000595758 TLR6Q9Y2C9 796 aa14.96□□□□□ -0.01
LIG1-208ENST00000595758 KIF26AQ9ULI4 1882 aaPredicted RBP14.95□□□□□ -0.02
LIG1-208ENST00000595758 MUC3AQ02505 3323 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 KANSL1LA0AUZ9 987 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 RTN2O75298 545 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 IGLV3-25P01717 112 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 IGLV3-27P01718 113 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 FTLP02792 175 aaPredicted RBP14.95□□□□□ -0.02
LIG1-208ENST00000595758 CD72P21854 359 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 GBP1P32455 592 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 CTHP32929 405 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 GJA4P35212 333 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 PITX1P78337 314 aaPredicted RBP14.95□□□□□ -0.02
LIG1-208ENST00000595758 LY6G5CQ5SRR4 150 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 NUGGCQ68CJ6 796 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 C1orf228Q6PIY5 440 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 WDR59Q6PJI9 974 aa14.95□□□□□ -0.02
LIG1-208ENST00000595758 ARCQ7LC44 396 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms