RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CNGA4Q8IV77 575 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 SIX5Q8N196 739 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 KIAA1958Q8N8K9 716 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 CSGALNACT1Q8TDX6 532 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 ZFRQ96KR1 1074 aaKnown RBP20.51■□□□□ 0.87
LSM4-203ENST00000593829 FAM83CQ9BQN1 747 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 DESI2Q9BSY9 194 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 ANKZF1Q9H8Y5 726 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 CWC15Q9P013 229 aaKnown RBP20.51■□□□□ 0.87
LSM4-203ENST00000593829 CFAP97Q9P2B7 532 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 LRRC53A6NM62 1247 aa20.5■□□□□ 0.87
LSM4-203ENST00000593829 PAPSS1O43252 624 aaPredicted RBP20.5■□□□□ 0.87
LSM4-203ENST00000593829 SLC44A4Q53GD3 710 aa20.5■□□□□ 0.87
LSM4-203ENST00000593829 HDXQ7Z353 690 aa20.5■□□□□ 0.87
LSM4-203ENST00000593829 OSCP1Q8WVF1 389 aa20.5■□□□□ 0.87
LSM4-203ENST00000593829 IQCDQ96DY2 449 aa20.5■□□□□ 0.87
LSM4-203ENST00000593829 KLF16Q9BXK1 252 aaPredicted RBP20.5■□□□□ 0.87
LSM4-203ENST00000593829 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
LSM4-203ENST00000593829 OLA1Q9NTK5 396 aaKnown RBP20.5■□□□□ 0.87
LSM4-203ENST00000593829 HELZP42694 1942 aaKnown RBP20.5■□□□□ 0.87
LSM4-203ENST00000593829 SOWAHDA6NJG2 315 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 MDM4O15151 490 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 GPR37L1O60883 481 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 LTFP02788 710 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 CHRNB2P17787 502 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 EFEMP1Q12805 493 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 PDGFRLQ15198 375 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 WHAMMP3Q1A5X7 153 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 HFE2Q6ZVN8 426 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 IPO4Q8TEX9 1081 aaKnown RBP20.49■□□□□ 0.87
LSM4-203ENST00000593829 RNF139Q8WU17 664 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 EDEM1Q92611 657 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 SYNCQ9H7C4 482 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 DUS2Q9NX74 493 aaKnown RBP20.49■□□□□ 0.87
LSM4-203ENST00000593829 A0A1W2PQJ5 194 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 FMO1Q01740 532 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 PTPN20Q4JDL3 420 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 TRIM72Q6ZMU5 477 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 IRF2BP2Q7Z5L9 587 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 MIB1Q86YT6 1006 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 C11orf16Q9NQ32 467 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 HEBP1Q9NRV9 189 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 MARCH2Q9P0N8 246 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 TJP2Q9UDY2 1190 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 RASAL2Q9UJF2 1139 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 ADAM21Q9UKJ8 722 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 STRIP2Q9ULQ0 834 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 SH3BP1Q9Y3L3 701 aa20.49■□□□□ 0.87
LSM4-203ENST00000593829 E2F8A0AVK6 867 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 KRBA1A5PL33 1030 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 FAM86C2PA6NEL3 165 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 IFNAR2P48551 515 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 MLF2Q15773 248 aaPredicted RBP20.48■□□□□ 0.87
LSM4-203ENST00000593829 ZSCAN26Q16670 478 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 TMEM31Q5JXX7 168 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 IER5LQ5T953 404 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 SFMBT2Q5VUG0 894 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 ERICH1Q86X53 443 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 TMTC1Q8IUR5 882 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 PBXIP1Q96AQ6 731 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 FAM149B1Q96BN6 582 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 SHDQ96IW2 340 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 TRIM62Q9BVG3 475 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 EBF3Q9H4W6 596 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 AIPL1Q9NZN9 384 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 WNT6Q9Y6F9 365 aa20.48■□□□□ 0.87
LSM4-203ENST00000593829 TECTAO75443 2155 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 SLC9A3R1O14745 358 aaPredicted RBP20.47■□□□□ 0.87
LSM4-203ENST00000593829 IRF1P10914 325 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 NOMO3P69849 1222 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 COG7P83436 770 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 PRKCQQ04759 706 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 TNK2Q07912 1038 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 ASIC2Q16515 512 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 NAA35Q5VZE5 725 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 TRIM68Q6AZZ1 485 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 CPA5Q8WXQ8 436 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 AGPAT1Q99943 283 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 MFSD1Q9H3U5 465 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 GTSE1Q9NYZ3 720 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 CTAGE9A4FU28 777 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 H3BQF6 201 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 ERBB2P04626 1255 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 CYP1A1P04798 512 aaPredicted RBP20.47■□□□□ 0.87
LSM4-203ENST00000593829 RUNX3Q13761 415 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 TRIM14Q14142 442 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 OR6B2Q6IFH4 312 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 BMP8AQ7Z5Y6 402 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 ATP2A3Q93084 1043 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 NUCKS1Q9H1E3 243 aaKnown RBP20.47■□□□□ 0.87
LSM4-203ENST00000593829 LINC00597Q9H2U6 94 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 HPS4Q9NQG7 708 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 TBC1D14Q9P2M4 693 aa20.47■□□□□ 0.87
LSM4-203ENST00000593829 FEZ2Q9UHY8 353 aaPredicted RBP20.47■□□□□ 0.87
LSM4-203ENST00000593829 KIF26AQ9ULI4 1882 aaPredicted RBP20.46■□□□□ 0.87
LSM4-203ENST00000593829 PRR33A8MZF0 331 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 NCAM1P13591 858 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 GLULP15104 373 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 KPNA1P52294 538 aaPredicted RBP20.46■□□□□ 0.87
LSM4-203ENST00000593829 MLLT6P55198 1093 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms