RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYMPK-202ENST00000593504 SLC26A7Q8TE54 656 aa15.68■□□□□ 0.1
SYMPK-202ENST00000593504 FICDQ9BVA6 458 aa15.68■□□□□ 0.1
SYMPK-202ENST00000593504 MRPL40Q9NQ50 206 aaKnown RBP15.68■□□□□ 0.1
SYMPK-202ENST00000593504 NDE1Q9NXR1 346 aa15.68■□□□□ 0.1
SYMPK-202ENST00000593504 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.68■□□□□ 0.1
SYMPK-202ENST00000593504 CTNNAL1Q9UBT7 734 aa15.68■□□□□ 0.1
SYMPK-202ENST00000593504 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
SYMPK-202ENST00000593504 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
SYMPK-202ENST00000593504 CDY1Q9Y6F8 540 aa15.68■□□□□ 0.1
SYMPK-202ENST00000593504 SERPINB8P50452 374 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 CRYBB1P53674 252 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 NLRP9Q7RTR0 991 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 STRA8Q7Z7C7 330 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 ANKRD52Q8NB46 1076 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 GANCQ8TET4 914 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 HSFY1Q96LI6 401 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 SNRNP25Q9BV90 132 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 ELOVL4Q9GZR5 314 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 NXF3Q9H4D5 531 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 CACYBPQ9HB71 228 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 TM9SF1O15321 606 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 NPR3P17342 541 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 NUMBP49757 651 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 ERFP50548 548 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 ZNF177Q13360 481 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 MAPRE2Q15555 327 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 JOSD2Q8TAC2 188 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PIH1D1Q9NWS0 290 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 NOCTQ9UK39 431 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 VANGL2Q9ULK5 521 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PCDHB5Q9Y5E4 795 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 KCNK1O00180 336 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 TIMM44O43615 452 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 KLHL2O95198 593 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 CNTFP26441 200 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 NOS2P35228 1153 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 AVPR1AP37288 418 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 ATN1P54259 1190 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 IL1RL1Q01638 556 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 B3GALNT2Q8NCR0 500 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 BLOC1S5Q8TDH9 187 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 SGF29Q96ES7 293 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 FAF1Q9UNN5 650 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 B2RBV5 119 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 CHKAP35790 457 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 MGAT5Q09328 741 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 MMRN1Q13201 1228 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PTPN20Q4JDL3 420 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 DNAL1Q4LDG9 190 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PPP1R26Q5T8A7 1209 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PLEKHA7Q6IQ23 1121 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PRPF39Q86UA1 669 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 PIGZQ86VD9 579 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 LRRC52Q8N7C0 313 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 WNT8BQ93098 351 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 MRPL45Q9BRJ2 306 aaKnown RBP15.67■□□□□ 0.1
SYMPK-202ENST00000593504 HEY2Q9UBP5 337 aa15.67■□□□□ 0.1
SYMPK-202ENST00000593504 LOC102724159A0A0B4J2E5 919 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 WDR27A2RRH5 827 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 HACD1B0YJ81 288 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 TARSP26639 723 aaKnown RBP15.66■□□□□ 0.1
SYMPK-202ENST00000593504 PWP2Q15269 919 aaKnown RBP15.66■□□□□ 0.1
SYMPK-202ENST00000593504 RGMBQ6NW40 437 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 NSL1Q96IY1 281 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 PGLYRP2Q96PD5 576 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 LHX5Q9H2C1 402 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 ITGB4P16144 1822 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 CHRNB2P17787 502 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 PDE1CQ14123 709 aaPredicted RBP15.66■□□□□ 0.1
SYMPK-202ENST00000593504 BBS12Q6ZW61 710 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 MON1BQ7L1V2 547 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 RNF157Q96PX1 679 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 DRC3Q9H069 523 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 PDZD7Q9H5P4 517 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 NHSL1Q5SYE7 1610 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.66■□□□□ 0.1
SYMPK-202ENST00000593504 DNAJC6O75061 913 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 ERBB2P04626 1255 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 ITGAVP06756 1048 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 RPL22P35268 128 aaKnown RBP15.66■□□□□ 0.1
SYMPK-202ENST00000593504 HADHAP40939 763 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 TSC22D3Q99576 134 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 SMIM35A0A1B0GVV1 85 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 RASSF10A6NK89 507 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 H0Y626 953 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 MGAT1P26572 445 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 MBTD1Q05BQ5 628 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 FAM171A1Q5VUB5 890 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 LPPQ93052 612 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 BHMTQ93088 406 aa15.66■□□□□ 0.1
SYMPK-202ENST00000593504 GPR25O00155 361 aa15.65■□□□□ 0.1
SYMPK-202ENST00000593504 YBX3P16989 372 aaKnown RBP eCLIP15.65■□□□□ 0.14e-8■□□□□ 10.4
SYMPK-202ENST00000593504 BGNP21810 368 aa15.65■□□□□ 0.1
SYMPK-202ENST00000593504 NOVP48745 357 aa15.65■□□□□ 0.1
SYMPK-202ENST00000593504 HIRAP54198 1017 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms