RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TRIM61Q5EBN2 209 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 EMC10Q5UCC4 262 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
VMP1-214ENST00000592106 ARMCX6Q7L4S7 300 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 SFTPA1Q8IWL2 248 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 TMEFF1Q8IYR6 380 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 ZNF276Q8N554 614 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 FBXL13Q8NEE6 735 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 UCMAQ8WVF2 138 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 RLN3Q8WXF3 142 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 TMEM176AQ96HP8 235 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 HEXIM2Q96MH2 286 aaKnown RBP10.66□□□□□ -0.7
VMP1-214ENST00000592106 SLC32A1Q9H598 525 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 RAB20Q9NX57 234 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
VMP1-214ENST00000592106 RASAL2Q9UJF2 1139 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 PLXND1Q9Y4D7 1925 aa10.66□□□□□ -0.7
VMP1-214ENST00000592106 DMXL1Q9Y485 3027 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 GFRA2O00451 464 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 NPC1O15118 1278 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 SLC16A3O15427 465 aaKnown RBP10.65□□□□□ -0.7
VMP1-214ENST00000592106 KRT37O76014 449 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 SMC2O95347 1197 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 TBX18O95935 607 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 HNRNPLP14866 589 aaKnown RBP eCLIP10.65□□□□□ -0.77e-9■■■■■ 28.7
VMP1-214ENST00000592106 CSRP1P21291 193 aaKnown RBP10.65□□□□□ -0.7
VMP1-214ENST00000592106 RPL6Q02878 288 aaKnown RBP10.65□□□□□ -0.7
VMP1-214ENST00000592106 ZNF252P-AS1Q0IIN9 211 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 MAP7D1Q3KQU3 841 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 UAP1L1Q3KQV9 507 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 ZCWPW2Q504Y3 356 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 ZNF394Q53GI3 561 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 DCAF17Q5H9S7 520 aaPredicted RBP10.65□□□□□ -0.7
VMP1-214ENST00000592106 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
VMP1-214ENST00000592106 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 EGFLAMQ63HQ2 1017 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 MIB1Q86YT6 1006 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 HDDC3Q8N4P3 179 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 WBP2Q969T9 261 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 NMUR1Q9HB89 426 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 ZDHHC4Q9NPG8 344 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 CISHQ9NSE2 258 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 OLA1Q9NTK5 396 aaKnown RBP10.65□□□□□ -0.7
VMP1-214ENST00000592106 OSER1Q9NX31 292 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 CALCOCO1Q9P1Z2 691 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 HESX1Q9UBX0 185 aa10.65□□□□□ -0.7
VMP1-214ENST00000592106 NUP205Q92621 2012 aa10.65□□□□□ -0.71
VMP1-214ENST00000592106 PATE3B3GLJ2 98 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 MDM4O15151 490 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 GREM1O60565 184 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 NDUFS2O75306 463 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 STC2O76061 302 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 CFIP05156 583 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 CEACAM1P13688 526 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 GABRG2P18507 467 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 CORO1AP31146 461 aaKnown RBP10.64□□□□□ -0.71
VMP1-214ENST00000592106 WASP42768 502 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 ZNF132P52740 706 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 BCAT1P54687 386 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 EFEMP1Q12805 493 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 STIM1Q13586 685 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 DUOXA1Q1HG43 343 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 SH3PXD2AQ5TCZ1 1133 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 PEAR1Q5VY43 1037 aaPredicted RBP10.64□□□□□ -0.71
VMP1-214ENST00000592106 ARHGAP17Q68EM7 881 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 SLC23A3Q6PIS1 610 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 KIAA1324Q6UXG2 1013 aaKnown RBP10.64□□□□□ -0.71
VMP1-214ENST00000592106 Q6ZNB5 142 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 IPO4Q8TEX9 1081 aaKnown RBP10.64□□□□□ -0.71
VMP1-214ENST00000592106 PLD4Q96BZ4 506 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 GABRG3Q99928 467 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 UBXN6Q9BZV1 441 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 GOLPH3LQ9H4A5 285 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 LRRC4Q9HBW1 653 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 SUSD2Q9UGT4 822 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 MBD1Q9UIS9 605 aaPredicted RBP10.64□□□□□ -0.71
VMP1-214ENST00000592106 NUDT5Q9UKK9 219 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 PKD1L2Q7Z442 2459 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 MYOFQ9NZM1 2061 aa10.64□□□□□ -0.71
VMP1-214ENST00000592106 ATXN2Q99700 1313 aaKnown RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 ANTXRLA6NF34 631 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 XPO1O14980 1071 aaKnown RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 PENKP01210 267 aaPredicted RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 HMBSP08397 361 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 ENGP17813 658 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 NDUFV2P19404 249 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 TBXAS1P24557 533 aaPredicted RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 PPP1R2P41236 205 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 PTGER3P43115 390 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 MAPK8P45983 427 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 PGFP49763 221 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 ZNF445P59923 1031 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 YWHAGP61981 247 aaKnown RBP eCLIP10.63□□□□□ -0.71
VMP1-214ENST00000592106 IRX4P78413 519 aa10.63□□□□□ -0.71
VMP1-214ENST00000592106 FKBP3Q00688 224 aaKnown RBP10.63□□□□□ -0.71
VMP1-214ENST00000592106 ARID5AQ03989 594 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms