RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 LHX5Q9H2C1 402 aa14.25□□□□□ -0.13
RDH13-219ENST00000591960 AGO1Q9UL18 857 aaKnown RBP14.25□□□□□ -0.13
RDH13-219ENST00000591960 STRIP2Q9ULQ0 834 aa14.25□□□□□ -0.13
RDH13-219ENST00000591960 WDR87Q6ZQQ6 2873 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 PROB1E7EW31 1015 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 K7EQS6 105 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 K7ESF4 209 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 MSI1O43347 362 aaKnown RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 CYP11B1P15538 503 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 EIF2DP41214 584 aaKnown RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 CCR3P51677 355 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 JAM2P57087 298 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 POLR2FP61218 127 aaKnown RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 UBXN1Q04323 297 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 TRIP4Q15650 581 aaPredicted RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 ZNF528Q3MIS6 628 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 TPGS1Q6ZTW0 290 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 NAT16Q8N8M0 369 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 PLD4Q96BZ4 506 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 NLRC4Q9NPP4 1024 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 POLR3BQ9NW08 1133 aaPredicted RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 MARK1Q9P0L2 795 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 HBS1LQ9Y450 684 aaKnown RBP14.24□□□□□ -0.13
RDH13-219ENST00000591960 R4GN57 208 aa14.24□□□□□ -0.13
RDH13-219ENST00000591960 SMTNL1A8MU46 457 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 TRIM24O15164 1050 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 TEX33O43247 280 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 TULP3O75386 442 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 PAPSS2O95340 614 aaPredicted RBP14.23□□□□□ -0.13
RDH13-219ENST00000591960 IGLV3-27P01718 113 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 PTMSP20962 102 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 KRT9P35527 623 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 CXCL12P48061 93 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 BPIFB4P59827 614 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 KDSRQ06136 332 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 TAF5Q15542 800 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 ANO4Q32M45 955 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 FBXO43Q4G163 708 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 PTPN20Q4JDL3 420 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 DENND1CQ8IV53 801 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 FAM217AQ8IXS0 508 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 EPS8L1Q8TE68 723 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 DQX1Q8TE96 717 aaKnown RBP14.23□□□□□ -0.13
RDH13-219ENST00000591960 EXOC4Q96A65 974 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 FAM149B1Q96BN6 582 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 PPP1R13BQ96KQ4 1090 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 PNKPQ96T60 521 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 DCLK3Q9C098 648 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 NAALADL1Q9UQQ1 740 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 ZNF510Q9Y2H8 683 aa14.23□□□□□ -0.13
RDH13-219ENST00000591960 A0A0A0MRY4 1105 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 CHURC1-FNTBB4DL54 471 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 NEDD8-MDP1E9PL57 170 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 SART1O43290 800 aaKnown RBP14.22□□□□□ -0.13
RDH13-219ENST00000591960 CACNG3O60359 315 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 GFPT2O94808 682 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 KAT7O95251 611 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 ERBB2P04626 1255 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 NCAM1P13591 858 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 TYRP14679 529 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 CDH5P33151 784 aaPredicted RBP14.22□□□□□ -0.13
RDH13-219ENST00000591960 DMWDQ09019 674 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 ZSCAN23Q3MJ62 389 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 TAF3Q5VWG9 929 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 BEND5Q7L4P6 421 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 RPLP0P6Q8NHW5 317 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 GOLGA1Q92805 767 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 BHMTQ93088 406 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 BBS2Q9BXC9 721 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 CBX8Q9HC52 389 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
RDH13-219ENST00000591960 ARHGEF4Q9NR80 690 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 PLK2Q9NYY3 685 aa14.22□□□□□ -0.13
RDH13-219ENST00000591960 NOCTQ9UK39 431 aaKnown RBP14.22□□□□□ -0.13
RDH13-219ENST00000591960 FAM170AA1A519 330 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 GFRA2O00451 464 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 PENKP01210 267 aaPredicted RBP14.21□□□□□ -0.13
RDH13-219ENST00000591960 MMEP08473 750 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 SOX5P35711 763 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 MRE11P49959 708 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 SEC13P55735 322 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 PITX1P78337 314 aaPredicted RBP14.21□□□□□ -0.13
RDH13-219ENST00000591960 EMC10Q5UCC4 262 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 FYB2Q5VWT5 728 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 OLFML1Q6UWY5 402 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 FAM183BPQ6ZVS7 135 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 TAC4Q86UU9 113 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 LUZP1Q86V48 1076 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 ALYREFQ86V81 257 aaKnown RBP14.21□□□□□ -0.13
RDH13-219ENST00000591960 CPXM2Q8N436 756 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 ZBTB44Q8NCP5 570 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 NEK11Q8NG66 645 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 ADAM32Q8TC27 787 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 USP33Q8TEY7 942 aa14.21□□□□□ -0.13
RDH13-219ENST00000591960 SLC20A1Q8WUM9 679 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms