RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 CES5AQ6NT32 575 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 SYCE2Q6PIF2 218 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ADAMTSL4Q6UY14 1074 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 PASD1Q8IV76 773 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 FUKQ8N0W3 1084 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 SMRP1Q8NCR6 262 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 FEZF2Q8TBJ5 459 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ING5Q8WYH8 240 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 FUBP3Q96I24 572 aaKnown RBP eCLIP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 FAXDC2Q96IV6 333 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 FAM124BQ9H5Z6 455 aaPredicted RBP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ACP6Q9NPH0 428 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 PLCB1Q9NQ66 1216 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ASAH2Q9NR71 780 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 SEPT11Q9NVA2 429 aaKnown RBP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 HCFC1R1Q9NWW0 138 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ZDHHC7Q9NXF8 308 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CLEC1BQ9P126 229 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CEP72Q9P209 647 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 HESX1Q9UBX0 185 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 TSPAN16Q9UKR8 245 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF638Q14966 1978 aaKnown RBP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 DOCK6Q96HP0 2047 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 HELZP42694 1942 aaKnown RBP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 GREB1Q4ZG55 1949 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CLUHO75153 1309 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 A0A1W2PQC6 194 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 LRRC53A6NM62 1247 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 O00370 1275 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 MED7O43513 233 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 NOL4O94818 638 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 PAEPP09466 180 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 TPM1P09493 284 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 HNRNPA1P09651 372 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 FAM163BP0C2L3 166 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 HAPLN1P10915 354 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 VDRP11473 427 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 HOXB8P17481 243 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ARNTP27540 789 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 HOXA9P31269 272 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SOX5P35711 763 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 LTBRP36941 435 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 STAT1P42224 750 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 MAGEA11P43364 429 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 TUFMP49411 452 aaKnown RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 RGS7P49802 495 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 MAP3K7CLP57077 242 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SLC8A3P57103 927 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 CLCQ05315 142 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 KCNC3Q14003 757 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 LRRC14Q15048 493 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 CFAP221Q4G0U5 840 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 PABPC1LQ4VXU2 614 aaKnown RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 TDRD12Q587J7 1177 aaKnown RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 RNF187Q5TA31 235 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 FAM171BQ6P995 826 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 LILRA6Q6PI73 481 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SARM1Q6SZW1 724 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 VSTM1Q6UX27 236 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 PDZD4Q76G19 769 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 GRASPQ7Z6J2 395 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SYT9Q86SS6 491 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ITIH5Q86UX2 942 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SLC47A2Q86VL8 602 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 LILRB2Q8N423 598 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 OR6P1Q8NGX9 317 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 GRIN3AQ8TCU5 1115 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 HDAC7Q8WUI4 952 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 TFAP2BQ92481 460 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF707Q96C28 371 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 CYFIP2Q96F07 1278 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 MSLNLQ96KJ4 702 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 RIPOR3Q96MK2 946 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 DNAJC7Q99615 494 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 STK33Q9BYT3 514 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 GPR88Q9GZN0 384 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 PDCL3Q9H2J4 239 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SLITRK6Q9H5Y7 841 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF334Q9HCZ1 680 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ST7Q9NRC1 585 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 TMEM30AQ9NV96 361 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 SOX13Q9UN79 622 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 COG5Q9UP83 839 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 DAAM1Q9Y4D1 1078 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 CEP83Q9Y592 693 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 NUP210Q8TEM1 1887 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-205ENST00000591383 ITIH6Q6UXX5 1313 aa6.75□□□□□ -1.33
VPS4B-205ENST00000591383 LRRC10BA6NIK2 292 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SLC38A8A6NNN8 435 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 RNF225M0QZC1 329 aaPredicted RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 FOXN3O00409 490 aaPredicted RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 PIK3R2O00459 728 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 GYPCP04921 128 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms