RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TJP1Q07157 1748 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 SETSIPP0DME0 302 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 TCHHL1Q5QJ38 904 aaPredicted RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 RNF157Q96PX1 679 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 VANGL2Q9ULK5 521 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 SRP72O76094 671 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 CST3P01034 146 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 GFAPP14136 432 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 IL10P22301 178 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 NR2C2P49116 596 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 PARP6Q2NL67 630 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 SEL1L3Q68CR1 1132 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 LINC00523Q86TU6 105 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 TSPAN17Q96FV3 270 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 P2RX7Q99572 595 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 SLC12A4Q9UP95 1085 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 ATP6V1B1P15313 513 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 TSHRP16473 764 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 C12orf65Q9H3J6 166 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 UBP1Q9NZI7 540 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 ZNF212Q9UDV6 495 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 RRN3P2A6NIE6 340 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 PDE5AO76074 875 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 CTSHP09668 335 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 JAG1P78504 1218 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 PTPN20Q4JDL3 420 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 TMEM259Q4ZIN3 620 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 SPATA2LQ8IUW3 424 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 PABPC5Q96DU9 382 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 CCDC134Q9H6E4 229 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 B4GALT5O43286 388 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 AP1G2O75843 785 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 ERBB2P04626 1255 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 CRADDP78560 199 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 BST1Q10588 318 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 CYLC2Q14093 348 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 RBBP7Q16576 425 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 ZC3H12AQ5D1E8 599 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 ALYREFQ86V81 257 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 ANKRD13AQ8IZ07 590 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 BORCS6Q96GS4 357 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 TSR3Q9UJK0 312 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 MYH13Q9UKX3 1938 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 USP54Q70EL1 1684 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 RNF103O00237 685 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 TPP1O14773 563 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 PMPCBO75439 489 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 CDKN2BP42772 138 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 MAP3K7CLP57077 242 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 MPP3Q13368 585 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 BNC2Q6ZN30 1099 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 NRBF2Q96F24 287 aa17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 APOBEC3GQ9HC16 384 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-215ENST00000590574 DNAJC6O75061 913 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 GJB1P08034 283 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ZDHHC17Q8IUH5 632 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 LRRC39Q96DD0 335 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ZNF317Q96PQ6 595 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 MECRQ9BV79 373 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 COQ4Q9Y3A0 265 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 TRPC5OSA6NMA1 111 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 CCDC130P13994 396 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 KCNA2P16389 499 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ACO1P21399 889 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 GP5P40197 560 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 IRGCQ6NXR0 463 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 RNF168Q8IYW5 571 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 FAM13CQ8NE31 585 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ING2Q9H160 280 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 XPNPEP3Q9NQH7 507 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 WFS1O76024 890 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 BTKQ06187 659 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ANO4Q32M45 955 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 FBXO47Q5MNV8 452 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 CPT1BQ92523 772 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 JADE3Q92613 823 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 CDT1Q9H211 546 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 MMADHCQ9H3L0 296 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 RANBP1P43487 201 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ZNF235Q14590 738 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 RNASEH2BQ5TBB1 312 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 KYAT3Q6YP21 454 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ZNF184Q99676 751 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 SNRNP25Q9BV90 132 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 IL1RL2Q9HB29 575 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 ARL8BQ9NVJ2 186 aa17.62■□□□□ 0.41
SMARCA4-215ENST00000590574 CYB561D2O14569 222 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 ZNF862O60290 1169 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 ECHS1P30084 290 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 ADIGQ0VDE8 80 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 GRTP1Q5TC63 336 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 ANKRD22Q5VYY1 191 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 GIPC2Q8TF65 315 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 NCLNQ969V3 563 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 ZBTB18Q99592 522 aa17.61■□□□□ 0.41
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