RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 EIF4EBP2Q13542 120 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 SMAD2Q15796 467 aaKnown RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 FAM78AQ5JUQ0 283 aa20.89■□□□□ 0.93
DNMT1-216ENST00000588952 ZSCAN18Q8TBC5 510 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 ADAMTS19Q8TE59 1207 aa20.89■□□□□ 0.93
DNMT1-216ENST00000588952 USP13Q92995 863 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 RSPRY1Q96DX4 576 aa20.89■□□□□ 0.93
DNMT1-216ENST00000588952 CDK5RAP1Q96SZ6 601 aaKnown RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 KLF16Q9BXK1 252 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 GKN1Q9NS71 199 aa20.89■□□□□ 0.93
DNMT1-216ENST00000588952 OLA1Q9NTK5 396 aaKnown RBP20.89■□□□□ 0.93
DNMT1-216ENST00000588952 GDE1Q9NZC3 331 aa20.89■□□□□ 0.93
DNMT1-216ENST00000588952 CPQQ9Y646 472 aa20.89■□□□□ 0.93
DNMT1-216ENST00000588952 HELZP42694 1942 aaKnown RBP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 NUP210Q8TEM1 1887 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 A0A0A6YYK5 440 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 SLC12A8A0AV02 714 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 SOBPA7XYQ1 873 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 CCDC175P0C221 793 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 IL9P15248 144 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 FCARP24071 287 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 GBP2P32456 591 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 PTPN9P43378 593 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 ZNF143P52747 638 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 ATP11AP98196 1134 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 SLC25A52Q3SY17 297 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 TADA2BQ86TJ2 420 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 ARID3BQ8IVW6 561 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 ASB16Q96NS5 453 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 NACA2Q9H009 215 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 FAM204AQ9H8W3 233 aa20.88■□□□□ 0.93
DNMT1-216ENST00000588952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.88■□□□□ 0.93
DNMT1-216ENST00000588952 SYNJ2BP-COX16A0A087WUM0 186 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 BTNL10A8MVZ5 291 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 C2CD4DB7Z1M9 353 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 M0QYT0 321 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 IRAK2O43187 625 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 HMBSP08397 361 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 LAMP2P13473 410 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 PSMA2P25787 234 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 SDC4P31431 198 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 KCNQ1P51787 676 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 CDO1Q16878 200 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 DAB2IPQ5VWQ8 1189 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 RHOT2Q8IXI1 618 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 ARFGAP1Q8N6T3 406 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 FNIP1Q8TF40 1166 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 CENPIQ92674 756 aaPredicted RBP20.87■□□□□ 0.93
DNMT1-216ENST00000588952 LRRC3BQ96PB8 259 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 CNPY3Q9BT09 278 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 PIGVQ9NUD9 493 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 DDIT4Q9NX09 232 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 COX16Q9P0S2 106 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 THEGQ9P2T0 379 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 STAP1Q9ULZ2 295 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 ARHGAP26Q9UNA1 814 aa20.87■□□□□ 0.93
DNMT1-216ENST00000588952 BUB1O43683 1085 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 IRF1P10914 325 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 WEE1P30291 646 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 AVPR1AP37288 418 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 VIPR2P41587 438 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 HDAC4P56524 1084 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 NME3Q13232 169 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 TRIP4Q15650 581 aaPredicted RBP20.86■□□□□ 0.93
DNMT1-216ENST00000588952 FAM172AQ8WUF8 416 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 SMARCD2Q92925 531 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 PGAP3Q96FM1 320 aaPredicted RBP20.86■□□□□ 0.93
DNMT1-216ENST00000588952 FCRL2Q96LA5 508 aaPredicted RBP20.86■□□□□ 0.93
DNMT1-216ENST00000588952 PHF7Q9BWX1 381 aaPredicted RBP20.86■□□□□ 0.93
DNMT1-216ENST00000588952 RRN3Q9NYV6 651 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 EPS15L1Q9UBC2 864 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 ZMYM5Q9UJ78 669 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 PAXBP1Q9Y5B6 917 aa20.86■□□□□ 0.93
DNMT1-216ENST00000588952 TMEM110-MUSTN1A8MSY1 372 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 LEFTY2O00292 366 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 GREM1O60565 184 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 ENDOD1O94919 500 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 IGLV3-27P01718 113 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 NOP2P46087 812 aaKnown RBP20.85■□□□□ 0.93
DNMT1-216ENST00000588952 HADHBP55084 474 aaKnown RBP20.85■□□□□ 0.93
DNMT1-216ENST00000588952 KIF5AQ12840 1032 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 OTOP3Q7RTS5 596 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 REXO1L1PQ8IX06 675 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 SH3RF2Q8TEC5 729 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 SLC39A13Q96H72 371 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 SERPINB11Q96P15 392 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 TRPV4Q9HBA0 871 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 ANLNQ9NQW6 1124 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 TDP1Q9NUW8 608 aa20.85■□□□□ 0.93
DNMT1-216ENST00000588952 HBS1LQ9Y450 684 aaKnown RBP20.85■□□□□ 0.93
DNMT1-216ENST00000588952 MACROD2A1Z1Q3 448 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 USP27XA6NNY8 438 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 MYO1FO00160 1098 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 SCAMP3O14828 347 aaKnown RBP20.84■□□□□ 0.93
DNMT1-216ENST00000588952 STC2O76061 302 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 TCF4P15884 667 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 RDXP35241 583 aaKnown RBP20.84■□□□□ 0.93
DNMT1-216ENST00000588952 TBX4P57082 545 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 DEUP1Q05D60 604 aa20.84■□□□□ 0.93
DNMT1-216ENST00000588952 USP4Q13107 963 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms