RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FCHO2Q0JRZ9 810 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 PPP1R15BQ5SWA1 713 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 DDX42Q86XP3 938 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 TRIM11Q96F44 468 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 CNOT8Q9UFF9 292 aaKnown RBP19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 TICRRQ7Z2Z1 1910 aa19.8■□□□□ 0.76
CLPTM1-209ENST00000588855 ZNF263O14978 683 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 NARSO43776 548 aaKnown RBP19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 STC2O76061 302 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 TRUB2O95900 331 aaKnown RBP19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 IGLV3-25P01717 112 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 TDGQ13569 410 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 OTUD1Q5VV17 481 aaPredicted RBP19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 PLEKHA7Q6IQ23 1121 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 ARCQ7LC44 396 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 ZFYVE19Q96K21 471 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 MCEEQ96PE7 176 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 BAG1Q99933 345 aaPredicted RBP19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 PACSIN1Q9BY11 444 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 ADAM33Q9BZ11 813 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 THAP2Q9H0W7 228 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 FAM204AQ9H8W3 233 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 MYO1AQ9UBC5 1043 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 SH3BP1Q9Y3L3 701 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 COL4A2P08572 1712 aa19.79■□□□□ 0.76
CLPTM1-209ENST00000588855 SIGLEC16A6NMB1 481 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 MYBL1P10243 752 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 TFE3P19532 575 aaPredicted RBP19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 RFC1P35251 1148 aaPredicted RBP19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 GALCP54803 685 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 COG7P83436 770 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 MAMLD1Q13495 774 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 TMTC1Q8IUR5 882 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 YAF2Q8IY57 180 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 ASIC4Q96FT7 647 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 CFAP57Q96MR6 1250 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 SERPINB11Q96P15 392 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 NPY6RQ99463 290 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 DDX23Q9BUQ8 820 aaKnown RBP19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 TRMT61BQ9BVS5 477 aaKnown RBP19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 PARVAQ9NVD7 372 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 MUTYHQ9UIF7 546 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 SORCS3Q9UPU3 1222 aa19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 HBS1LQ9Y450 684 aaKnown RBP19.78■□□□□ 0.76
CLPTM1-209ENST00000588855 SYNJ2BP-COX16A0A087WUM0 186 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 C2CD4BA6NLJ0 364 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 IRAK2O43187 625 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 GREM1O60565 184 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 GDI1P31150 447 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 SULT1E1P49888 294 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 RPL7AP62424 266 aaKnown RBP19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 TRIP4Q15650 581 aaPredicted RBP19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 RAD9BQ6WBX8 426 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 CCDC170Q8IYT3 715 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 RXFP2Q8WXD0 754 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 ANP32BQ92688 251 aaKnown RBP19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 PLD4Q96BZ4 506 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 ARHGEF26Q96DR7 871 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 TBCBQ99426 244 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 DDIT4Q9NX09 232 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 COX16Q9P0S2 106 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 CALCOCO1Q9P1Z2 691 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 STAP1Q9ULZ2 295 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 WNT6Q9Y6F9 365 aa19.77■□□□□ 0.76
CLPTM1-209ENST00000588855 COL4A3Q01955 1670 aa19.77■□□□□ 0.75
CLPTM1-209ENST00000588855 E2F8A0AVK6 867 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 ANKRD62A6NC57 917 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 IGLV3-27P01718 113 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 CYLC1P35663 651 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 TBX4P57082 545 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 GPC5P78333 572 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 NNTQ13423 1086 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 EIF4EBP2Q13542 120 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 TRIM68Q6AZZ1 485 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 CC2D1AQ6P1N0 951 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 DCUN1D2Q6PH85 259 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 NT5C3BQ969T7 300 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 THG1LQ9NWX6 298 aaKnown RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 RRN3Q9NYV6 651 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 LSM7Q9UK45 103 aaKnown RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 DUSP12Q9UNI6 340 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 TLR6Q9Y2C9 796 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 SCINQ9Y6U3 715 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 M0QYT0 321 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 CHADO15335 359 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 LCA5LO95447 670 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 KLKB1P03952 638 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 H2AFZP0C0S5 128 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 PDGFRAP16234 1089 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 GPD1P21695 349 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 CORO1AP31146 461 aaKnown RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 SDC4P31431 198 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 NME3Q13232 169 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 C15orf59Q2T9L4 293 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 SLC25A52Q3SY17 297 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 CCDC14Q49A88 953 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 ARHGAP29Q52LW3 1261 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 H2AFVQ71UI9 128 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 BBS7Q8IWZ6 715 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms