RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SMPD4Q9NXE4 827 aa8.55□□□□□ -1.04
APOC1-202ENST00000588750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.55□□□□□ -1.04
APOC1-202ENST00000588750 LCMT1Q9UIC8 334 aa8.55□□□□□ -1.04
APOC1-202ENST00000588750 CCL26Q9Y258 94 aa8.55□□□□□ -1.04
APOC1-202ENST00000588750 SCINQ9Y6U3 715 aa8.55□□□□□ -1.04
APOC1-202ENST00000588750 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 IRAK2O43187 625 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 NRDCO43847 1150 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 RTN2O75298 545 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 ERBB2P04626 1255 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 IRF1P10914 325 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 KRT3P12035 628 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 SDC4P31431 198 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 CCR1P32246 355 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 EIF2DP41214 584 aaKnown RBP8.54□□□□□ -1.04
APOC1-202ENST00000588750 MATKP42679 507 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 CLCN5P51795 746 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 TBX4P57082 545 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 STARD6P59095 220 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 GRSF1Q12849 480 aaKnown RBP eCLIP8.54□□□□□ -1.04
APOC1-202ENST00000588750 LRRC32Q14392 662 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 ARL13BQ3SXY8 428 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 PTPN20Q4JDL3 420 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 TMC6Q7Z403 805 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.54□□□□□ -1.04
APOC1-202ENST00000588750 XYLT1Q86Y38 959 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 SIX5Q8N196 739 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 ATP6V0D2Q8N8Y2 350 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 CLEC4CQ8WTT0 213 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 SLC20A1Q8WUM9 679 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 FAM3CQ92520 227 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 PBXIP1Q96AQ6 731 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 DNAJC7Q99615 494 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 PRRX2Q99811 253 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 RPP25Q9BUL9 199 aaKnown RBP8.54□□□□□ -1.04
APOC1-202ENST00000588750 OSBPL6Q9BZF3 934 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 EBF3Q9H4W6 596 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 ECT2Q9H8V3 914 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 FAM204AQ9H8W3 233 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 PARVAQ9NVD7 372 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.54□□□□□ -1.043e-11■■■□□ 18.3
APOC1-202ENST00000588750 OSER1Q9NX31 292 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 IMPACTQ9P2X3 320 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 CYTH4Q9UIA0 394 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 CA14Q9ULX7 337 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 PIAS3Q9Y6X2 628 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 XIRP2A4UGR9 3374 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 PRUNE2Q8WUY3 3088 aa8.54□□□□□ -1.04
APOC1-202ENST00000588750 KANSL1LA0AUZ9 987 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SPECC1L-ADORA2AF8WAN1 911 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 GOLGA8SH3BPF8 625 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 NARSO43776 548 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 AKR1B10O60218 316 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 MFAP3LO75121 409 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 STC2O76061 302 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 IPO7O95373 1038 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 TRUB2O95900 331 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 TBX18O95935 607 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 HMBSP08397 361 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 ADH5P11766 374 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 CHRNB2P17787 502 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 CDC25BP30305 580 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 CORO1AP31146 461 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 ZNF75DP51815 510 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 RNASE9P60153 205 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 PPP2R5DQ14738 602 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 EML3Q32P44 896 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SLC25A52Q3SY17 297 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 FBXO43Q4G163 708 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 DGKKQ5KSL6 1271 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 BRMS1LQ5PSV4 323 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 C10orf76Q5T2E6 689 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 DNAJC24Q6P3W2 148 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 DCUN1D2Q6PH85 259 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 MMS22LQ6ZRQ5 1243 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 TPRG1Q6ZUI0 275 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 BHLHA9Q7RTU4 235 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 ADGRG2Q8IZP9 1017 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 DEFB106AQ8N104 65 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 TXLNBQ8N3L3 684 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SYNPOQ8N3V7 929 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 CPXM2Q8N436 756 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SLC30A5Q8TAD4 765 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 DQX1Q8TE96 717 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 PGAP3Q96FM1 320 aaPredicted RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 ZFRQ96KR1 1074 aaKnown RBP8.53□□□□□ -1.04
APOC1-202ENST00000588750 BTN2A3PQ96KV6 586 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SLC2A13Q96QE2 648 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 PPP1R9BQ96SB3 815 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 C11orf70Q9BRQ4 267 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SPHK2Q9NRA0 654 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 HEBP1Q9NRV9 189 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 ABHD10Q9NUJ1 306 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 DDIT4Q9NX09 232 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 ADAMTS1Q9UHI8 967 aa8.53□□□□□ -1.04
APOC1-202ENST00000588750 SFMBT1Q9UHJ3 866 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms