RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 GAB4Q2WGN9 574 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 EFHC1Q5JVL4 640 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 SFMBT2Q5VUG0 894 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 RHBDF2Q6PJF5 856 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 XYLT1Q86Y38 959 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 SUGP1Q8IWZ8 645 aaKnown RBP21.1■□□□□ 0.97
DDX39A-207ENST00000588542 TMEM105Q8N8V8 129 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 DQX1Q8TE96 717 aaKnown RBP21.1■□□□□ 0.97
DDX39A-207ENST00000588542 FAM3CQ92520 227 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 C18orf8Q96DM3 657 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 SLC2A13Q96QE2 648 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 LSM7Q9UK45 103 aaKnown RBP21.1■□□□□ 0.97
DDX39A-207ENST00000588542 CAPN11Q9UMQ6 739 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 WDFY4Q6ZS81 3184 aa21.1■□□□□ 0.97
DDX39A-207ENST00000588542 MMP8P22894 467 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 FZD5Q13467 585 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 DHCR24Q15392 516 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 SARM1Q6SZW1 724 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 SLC26A9Q7LBE3 791 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 ZDHHC17Q8IUH5 632 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 CCDC105Q8IYK2 499 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 ZNF397Q8NF99 534 aaPredicted RBP21.09■□□□□ 0.97
DDX39A-207ENST00000588542 SLC30A5Q8TAD4 765 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 PLD4Q96BZ4 506 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 IQCDQ96DY2 449 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 TRIM62Q9BVG3 475 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 OSBPL6Q9BZF3 934 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 SIT1Q9Y3P8 196 aa21.09■□□□□ 0.97
DDX39A-207ENST00000588542 FAM170BA6NMN3 283 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 HSF2BPO75031 334 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 GRAP2O75791 330 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 IGLV3-27P01718 113 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 AVPR2P30518 371 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 CORO1AP31146 461 aaKnown RBP21.08■□□□□ 0.97
DDX39A-207ENST00000588542 PITX1P78337 314 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-207ENST00000588542 ZBED6P86452 979 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 CENPCQ03188 943 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 PTP4A2Q12974 167 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 NR1H3Q13133 447 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 UBXN2BQ14CS0 331 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-207ENST00000588542 TOGARAM2Q6ZUX3 1019 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 DEFB106AQ8N104 65 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 CPLX3Q8WVH0 158 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 DCLK3Q9C098 648 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 HAUS4Q9H6D7 363 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 DLGAP2Q9P1A6 1054 aa21.08■□□□□ 0.97
DDX39A-207ENST00000588542 AGO1Q9UL18 857 aaKnown RBP21.08■□□□□ 0.97
DDX39A-207ENST00000588542 NDRG2Q9UN36 371 aaKnown RBP21.08■□□□□ 0.97
DDX39A-207ENST00000588542 CAPN9O14815 690 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 IGLV3-25P01717 112 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 DCNP07585 359 aaKnown RBP21.07■□□□□ 0.96
DDX39A-207ENST00000588542 SCNN1AP37088 669 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 EIF4EBP2Q13542 120 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-207ENST00000588542 PON2Q15165 354 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 LY6G5CQ5SRR4 150 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 C1orf228Q6PIY5 440 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 MMS22LQ6ZRQ5 1243 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 ZNF571Q7Z3V5 609 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-207ENST00000588542 TAC4Q86UU9 113 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 TMEM25Q86YD3 366 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 VSTM4Q8IW00 320 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 MSANTD4Q8NCY6 345 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 ADAM32Q8TC27 787 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 NELL2Q99435 816 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 SPHK2Q9NRA0 654 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 ZNF510Q9Y2H8 683 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 MRPS17Q9Y2R5 130 aaKnown RBP21.07■□□□□ 0.96
DDX39A-207ENST00000588542 ATG2BQ96BY7 2078 aa21.07■□□□□ 0.96
DDX39A-207ENST00000588542 DAB1O75553 588 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 SKILP12757 684 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 CASP14P31944 242 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 RING1Q06587 406 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 NNTQ13423 1086 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 DCAF6Q58WW2 860 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 HGSNATQ68CP4 663 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 SPECC1LQ69YQ0 1117 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 PHF13Q86YI8 300 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-207ENST00000588542 DENND1CQ8IV53 801 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 SYN2Q92777 582 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-207ENST00000588542 P2RY11Q96G91 374 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 SLC39A13Q96H72 371 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 SERPINB11Q96P15 392 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 C11orf70Q9BRQ4 267 aa21.06■□□□□ 0.96
DDX39A-207ENST00000588542 NUCKS1Q9H1E3 243 aaKnown RBP21.06■□□□□ 0.96
DDX39A-207ENST00000588542 FBRSL1Q9HCM7 1045 aaKnown RBP21.06■□□□□ 0.96
DDX39A-207ENST00000588542 SEPT11Q9NVA2 429 aaKnown RBP21.06■□□□□ 0.96
DDX39A-207ENST00000588542 LUC7L2Q9Y383 392 aaKnown RBP21.06■□□□□ 0.96
DDX39A-207ENST00000588542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.06■□□□□ 0.968e-8■■■□□ 14.9
DDX39A-207ENST00000588542 TRDMT1O14717 391 aaKnown RBP21.05■□□□□ 0.96
DDX39A-207ENST00000588542 TRUB2O95900 331 aaKnown RBP21.05■□□□□ 0.96
DDX39A-207ENST00000588542 ADH1CP00326 375 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 ADH5P11766 374 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 TNFAIP3P21580 790 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 OPRD1P41143 372 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 NSFP46459 744 aaKnown RBP21.05■□□□□ 0.96
DDX39A-207ENST00000588542 GALK1P51570 392 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 TBX4P57082 545 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 KLHL30Q0D2K2 578 aa21.05■□□□□ 0.96
DDX39A-207ENST00000588542 TMEM196Q5HYL7 178 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms