RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF217O75362 1048 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 RHOBTB3O94955 611 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 PROS1P07225 676 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 MXI1P50539 228 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 KIF11P52732 1056 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 DPYDQ12882 1025 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 ADAM9Q13443 819 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 STARD3Q14849 445 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 DCAF17Q5H9S7 520 aaPredicted RBP14.4□□□□□ -0.1
HDAC5-208ENST00000588419 TCERG1LQ5VWI1 586 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 KRT39Q6A163 491 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 CCDC186Q7Z3E2 898 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 SCD5Q86SK9 330 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 SLC41A1Q8IVJ1 513 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 MINDY1Q8N5J2 469 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 CEP76Q8TAP6 659 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 ARID3AQ99856 593 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 DUSP9Q99956 384 aaKnown RBP14.4□□□□□ -0.1
HDAC5-208ENST00000588419 SCNM1Q9BWG6 230 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 DUSP16Q9BY84 665 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 GOLPH3LQ9H4A5 285 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 PNPLA8Q9NP80 782 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 SLC6A14Q9UN76 642 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 STARD13Q9Y3M8 1113 aa14.4□□□□□ -0.1
HDAC5-208ENST00000588419 SLC12A8A0AV02 714 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 MEI4A8MW99 385 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 HYAL3O43820 417 aaPredicted RBP14.39□□□□□ -0.11
HDAC5-208ENST00000588419 EPB41P11171 864 aaKnown RBP14.39□□□□□ -0.11
HDAC5-208ENST00000588419 PSEN1P49768 467 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 SIM1P81133 766 aaPredicted RBP14.39□□□□□ -0.11
HDAC5-208ENST00000588419 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 SPDYCQ5MJ68 293 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 Q6ZNB5 142 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 KRBA2Q6ZNG9 492 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 DENND1CQ8IV53 801 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 TMEM174Q8WUU8 243 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 SEMA4DQ92854 862 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 GABRG3Q99928 467 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 GDPD2Q9HCC8 539 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 CISHQ9NSE2 258 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 ZMIZ1Q9ULJ6 1067 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 STRIP2Q9ULQ0 834 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 STON1Q9Y6Q2 735 aa14.39□□□□□ -0.11
HDAC5-208ENST00000588419 NYNRINQ9P2P1 1898 aaKnown RBP14.39□□□□□ -0.11
HDAC5-208ENST00000588419 CYBBP04839 570 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 SERPINF2P08697 491 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 CISD3P0C7P0 127 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 MAOBP27338 520 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 MFAP3P55082 362 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 YWHAGP61981 247 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC5-208ENST00000588419 ARID5AQ03989 594 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 NFIL3Q16649 462 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 GEN1Q17RS7 908 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 GOLGA7BQ2TAP0 167 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 PEAR1Q5VY43 1037 aaPredicted RBP14.38□□□□□ -0.11
HDAC5-208ENST00000588419 KLHDC10Q6PID8 442 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 RABEPKQ7Z6M1 372 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 PIGZQ86VD9 579 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 GUF1Q8N442 669 aaKnown RBP14.38□□□□□ -0.11
HDAC5-208ENST00000588419 UCMAQ8WVF2 138 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 P2RY11Q96G91 374 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 TMEM176AQ96HP8 235 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 MRGPRX1Q96LB2 322 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 CDK5RAP1Q96SZ6 601 aaKnown RBP14.38□□□□□ -0.11
HDAC5-208ENST00000588419 CIPCQ9C0C6 399 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 MIR1-1HGQ9H1L0 117 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 MARCH2Q9P0N8 246 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 ZNF510Q9Y2H8 683 aa14.38□□□□□ -0.11
HDAC5-208ENST00000588419 MUC22E2RYF6 1773 aaPredicted RBP14.37□□□□□ -0.11
HDAC5-208ENST00000588419 KLKB1P03952 638 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 HOXD12P35452 270 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 CHKAP35790 457 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 IL12RB1P42701 662 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 TKTL1P51854 596 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 SLC8A3P57103 927 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 COG7P83436 770 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 NUMA1Q14980 2115 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 FUT11Q495W5 492 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 SYCP2LQ5T4T6 812 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 FYB2Q5VWT5 728 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 ANKS1BQ7Z6G8 1248 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 ARHGAP18Q8N392 663 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 SLC4A11Q8NBS3 891 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 FBXL13Q8NEE6 735 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 DDI1Q8WTU0 396 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 NDRG1Q92597 394 aaKnown RBP14.37□□□□□ -0.11
HDAC5-208ENST00000588419 ULBP1Q9BZM6 244 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 DCLK3Q9C098 648 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 PRDM16Q9HAZ2 1276 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 CAPN10Q9HC96 672 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 RAB20Q9NX57 234 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 CLIC5Q9NZA1 410 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
HDAC5-208ENST00000588419 ZDHHC9Q9Y397 364 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 CACNA1EQ15878 2313 aa14.37□□□□□ -0.11
HDAC5-208ENST00000588419 ARHGAP33O14559 1287 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 CETN3O15182 167 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 STX10O60499 249 aa14.36□□□□□ -0.11
HDAC5-208ENST00000588419 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
HDAC5-208ENST00000588419 TSPAN3O60637 253 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms