RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 SPC24Q8NBT2 197 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 OLIG1Q8TAK6 271 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 CTNNBL1Q8WYA6 563 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 ATP2A3Q93084 1043 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 NT5C3BQ969T7 300 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 EXOC4Q96A65 974 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 MSANTD3Q96H12 275 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 CALR3Q96L12 384 aaKnown RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 DDX23Q9BUQ8 820 aaKnown RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 SLC2A4RGQ9NR83 387 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 TAS2R14Q9NYV8 317 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 TJP2Q9UDY2 1190 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 NAALADL1Q9UQQ1 740 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 EPN1Q9Y6I3 576 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 ATG2AQ2TAZ0 1938 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 C2CD4BA6NLJ0 364 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 EIF3CLB5ME19 914 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 GOLGA8SH3BPF8 625 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 ENDOD1O94919 500 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 LCA5LO95447 670 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 PRAMEF12O95522 483 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 TRUB2O95900 331 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 IGLV3-25P01717 112 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 CYP1A2P05177 515 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 TMEM253P0C7T8 217 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 RRM1P23921 792 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 SDC4P31431 198 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 CCR1P32246 355 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 PTPN9P43378 593 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 SLC11A2P49281 568 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 ZNF143P52747 638 aaPredicted RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 TBX4P57082 545 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 KRT83P78385 493 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 GFPT1Q06210 699 aaPredicted RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 USP4Q13107 963 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 MAMLD1Q13495 774 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 PPP2R5DQ14738 602 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 BRMS1LQ5PSV4 323 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 PPP1R15BQ5SWA1 713 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 SYPL2Q5VXT5 272 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 POTEHQ6S545 545 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 HFE2Q6ZVN8 426 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 STRADAQ7RTN6 431 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 DQX1Q8TE96 717 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 FNIP1Q8TF40 1166 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 OSCP1Q8WVF1 389 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 DNASE1L2Q92874 299 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 NPY6RQ99463 290 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 EIF3CQ99613 913 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 DDX50Q9BQ39 737 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 KXD1Q9BQD3 176 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 BRD9Q9H8M2 597 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 GKN1Q9NS71 199 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 DDIT4Q9NX09 232 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 DUS2Q9NX74 493 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 SMPD4Q9NXE4 827 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 CFAP97Q9P2B7 532 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 UVRAGQ9P2Y5 699 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 CNOT8Q9UFF9 292 aaKnown RBP9.45□□□□□ -0.9
CIRBP-218ENST00000588344 SFMBT1Q9UHJ3 866 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 NUDT5Q9UKK9 219 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 DUSP12Q9UNI6 340 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 CCL26Q9Y258 94 aa9.45□□□□□ -0.9
CIRBP-218ENST00000588344 UNC80Q8N2C7 3258 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 TCRBV5S1A1TA0A578 114 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 TMEM191CA6NGB0 347 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 M0QYT0 321 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 IRAK2O43187 625 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 GRAP2O75791 330 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 STC2O76061 302 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 NDUFA10O95299 355 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 NFATC1O95644 943 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 IGLV3-27P01718 113 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 APOEP02649 317 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 ABCB4P21439 1286 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 GPD1P21695 349 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 GDI1P31150 447 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 RDXP35241 583 aaKnown RBP9.44□□□□□ -0.9
CIRBP-218ENST00000588344 RFC1P35251 1148 aaPredicted RBP9.44□□□□□ -0.9
CIRBP-218ENST00000588344 MAGEA1P43355 309 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 IFNAR2P48551 515 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 GALCP54803 685 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 AIF1P55008 147 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 EIF4EBP2Q13542 120 aaPredicted RBP9.44□□□□□ -0.9
CIRBP-218ENST00000588344 ARL13BQ3SXY8 428 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 PREPLQ4J6C6 727 aaPredicted RBP9.44□□□□□ -0.9
CIRBP-218ENST00000588344 C2CD6Q53TS8 623 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 RHOT2Q8IXI1 618 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 ADGRG2Q8IZP9 1017 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 ATP6V0D2Q8N8Y2 350 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 CSGALNACT1Q8TDX6 532 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 RXFP2Q8WXD0 754 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 RSAD2Q8WXG1 361 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 CENPIQ92674 756 aaPredicted RBP9.44□□□□□ -0.9
CIRBP-218ENST00000588344 RNF34Q969K3 372 aa9.44□□□□□ -0.9
CIRBP-218ENST00000588344 ZNF653Q96CK0 615 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms