RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 IL4RP24394 825 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 CDC25CP30307 473 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 FDFT1P37268 417 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 OSTNP61366 133 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 RCN2Q14257 317 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 TMEM132DQ14C87 1099 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 CCDC14Q49A88 953 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 STEAP4Q687X5 459 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 JADE1Q6IE81 842 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 CDHR3Q6ZTQ4 885 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 MARK2Q7KZI7 788 aaKnown RBP19.23■□□□□ 0.67
DDX39A-206ENST00000587730 SAMD7Q7Z3H4 446 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 ALYREFQ86V81 257 aaKnown RBP19.23■□□□□ 0.67
DDX39A-206ENST00000587730 STKLD1Q8NE28 680 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 TSC22D3Q99576 134 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 VCX3BQ9H321 246 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 ASB3Q9Y575 518 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 HEY1Q9Y5J3 304 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 E5RJQ4 531 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 GLRA3O75311 464 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SP100P23497 879 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-206ENST00000587730 GRK2P25098 689 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 PTPN9P43378 593 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 AQP5P55064 265 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SATB1Q01826 763 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SLC6A3Q01959 620 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 FSTL1Q12841 308 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SEMA5AQ13591 1074 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 TTC7BQ86TV6 843 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 PPP1R14CQ8TAE6 165 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 DEPDC1BQ8WUY9 529 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 WDR60Q8WVS4 1066 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SIGLEC10Q96LC7 697 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SH3GL3Q99963 347 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 CCDC106Q9BWC9 280 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 DNAI2Q9GZS0 605 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 HMGXB4Q9UGU5 601 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 TSPAN16Q9UKR8 245 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 SOX13Q9UN79 622 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 PLA2G4CQ9UP65 541 aa19.22■□□□□ 0.67
DDX39A-206ENST00000587730 CXorf49A8MYA2 514 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 ALDH1A2O94788 518 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 ENO1P06733 434 aaKnown RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 CYP2C8P10632 490 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 HIRAP54198 1017 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 MTM1Q13496 603 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 DPYSL2Q16555 572 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 INSCQ1MX18 579 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 ZNF484Q5JVG2 852 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 TMCO4Q5TGY1 634 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 MYLK4Q86YV6 388 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 ULK2Q8IYT8 1036 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 RBM15BQ8NDT2 890 aaKnown RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 PCDH19Q8TAB3 1148 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 FAM172AQ8WUF8 416 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 NRG4Q8WWG1 115 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 RILPQ96NA2 401 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 QKIQ96PU8 341 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SLC13A1Q9BZW2 595 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 YIPF3Q9GZM5 350 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 NRDE2Q9H7Z3 1164 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SLC24A3Q9HC58 644 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 EIF2B3Q9NR50 452 aaKnown RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 NDE1Q9NXR1 346 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 MOCS1Q9NZB8 636 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 MORF4L1Q9UBU8 362 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 DCDC2Q9UHG0 476 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 MAD1L1Q9Y6D9 718 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 A6NJR5 290 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 B4GALT5O43286 388 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 STK10O94804 968 aaKnown RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SLC25A27O95847 323 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 NDST1P52848 882 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 C15orf59Q2T9L4 293 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 EFCAB12Q6NXP0 572 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SCYL2Q6P3W7 929 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 OLFML1Q6UWY5 402 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 TMEM110Q86TL2 294 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 CEP120Q8N960 986 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 UBA3Q8TBC4 463 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 ZNF483Q8TF39 744 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 JADE3Q92613 823 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 PRR11Q96HE9 360 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SNRNP25Q9BV90 132 aaKnown RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SLC4A5Q9BY07 1137 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 SPATC1LQ9H0A9 340 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 NGRNQ9NPE2 291 aaKnown RBP19.21■□□□□ 0.67
DDX39A-206ENST00000587730 PCMTD2Q9NV79 361 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 ARMCX1Q9P291 453 aa19.21■□□□□ 0.67
DDX39A-206ENST00000587730 GPR25O00155 361 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 SMIM24O75264 130 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 CSH1P0DML2 217 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 CSH2P0DML3 217 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 XIAPP98170 497 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 DSG1Q02413 1049 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 SLC30A9Q6PML9 568 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 ARHGAP18Q8N392 663 aa19.2■□□□□ 0.66
DDX39A-206ENST00000587730 PIWIL2Q8TC59 973 aaKnown RBP19.2■□□□□ 0.66
DDX39A-206ENST00000587730 PPP4R1Q8TF05 950 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms