RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ADAMTS18Q8TE60 1221 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 RUNDC1Q96C34 613 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 FCRL4Q96PJ5 515 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 FYTTD1Q96QD9 318 aaKnown RBP5.09□□□□□ -1.59
VMP1-205ENST00000587470 PPP1R9BQ96SB3 815 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 STK32BQ9NY57 414 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 USP22Q9UPT9 525 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 ARHGEF28Q8N1W1 1705 aaKnown RBP5.09□□□□□ -1.6
VMP1-205ENST00000587470 CDC42BPGQ6DT37 1551 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 USP19O94966 1318 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 KCNU1A8MYU2 1149 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 TBX3O15119 743 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 PMPCBO75439 489 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 TOMM70O94826 608 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 TOP3BO95985 862 aaKnown RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 ALDH5A1P51649 535 aaPredicted RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 SUMO2P61956 95 aaKnown RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 TRIP6Q15654 476 aaKnown RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 MINDY4Q4G0A6 757 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 C4orf46Q504U0 113 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 ZDHHC24Q6UX98 284 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 DPY19L3Q6ZPD9 716 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 BCDIN3DQ7Z5W3 292 aaKnown RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 CNGA4Q8IV77 575 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 MAML1Q92585 1016 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 SPSB4Q96A44 273 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 C22orf23Q9BZE7 217 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 TRIM5Q9C035 493 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 PDGFCQ9NRA1 345 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 TUBA8Q9NY65 449 aaPredicted RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 L1RE1Q9UN81 338 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 DRG1Q9Y295 367 aaKnown RBP5.08□□□□□ -1.6
VMP1-205ENST00000587470 CDY1Q9Y6F8 540 aa5.08□□□□□ -1.6
VMP1-205ENST00000587470 ANKARQ7Z5J8 1434 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 USP47Q96K76 1375 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 ISM1B1AKI9 464 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 BTBD19C9JJ37 291 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 PROB1E7EW31 1015 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 FAM227AF5H4B4 570 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 CES2O00748 559 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 PPEF2O14830 753 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 BMP15O95972 392 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 PHKG2P15735 406 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 EPHA3P29320 983 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 ARHGAP25P42331 645 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 SUMO3P55854 103 aaPredicted RBP5.07□□□□□ -1.6
VMP1-205ENST00000587470 CNN3Q15417 329 aaKnown RBP5.07□□□□□ -1.6
VMP1-205ENST00000587470 SLC15A2Q16348 729 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 FAM187BQ17R55 369 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 ODR4Q5SWX8 454 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 TMEM63BQ5T3F8 832 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 ZNF813Q6ZN06 617 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 MICU3Q86XE3 530 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 CHPFQ8IZ52 775 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 C9orf106Q8NAJ2 232 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 OR56A3Q8NH54 315 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 DNAJB14Q8TBM8 379 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 CCDC17Q96LX7 622 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 ZNF48Q96MX3 618 aaPredicted RBP5.07□□□□□ -1.6
VMP1-205ENST00000587470 FAM118BQ9BPY3 351 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 TMEM79Q9BSE2 394 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 VPS16Q9H269 839 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 C1orf112Q9NSG2 853 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 THRAP3Q9Y2W1 955 aaKnown RBP5.07□□□□□ -1.6
VMP1-205ENST00000587470 THSD7AQ9UPZ6 1657 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 TULP4Q9NRJ4 1543 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 ATP7BP35670 1465 aa5.07□□□□□ -1.6
VMP1-205ENST00000587470 FMN2Q9NZ56 1722 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 ARHGEF10O15013 1369 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 SPATA31A1Q5TZJ5 1347 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 EVC2Q86UK5 1308 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 LOC102723971A0A1B0GUV8 181 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 CFAP69A5D8W1 941 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 TRIM43BA6NCK2 446 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 MBD3L4A6NDZ8 208 aaPredicted RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 MBD3L3A6NE82 208 aaPredicted RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 PYCARD-AS1I3L0S3 204 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 M0R3H8 397 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 CCP110O43303 1012 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 FRS3O43559 492 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 BCAR3O75815 825 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 HSPA5P11021 654 aaKnown RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 IL1R2P27930 398 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 UQCRC1P31930 480 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 PSG6Q00889 435 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 FAM102BQ5T8I3 360 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 DENND2CQ68D51 928 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 SWSAP1Q6NVH7 229 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 PTCHD4Q6ZW05 846 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 TRIM43Q96BQ3 446 aaPredicted RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 NMD3Q96D46 503 aaKnown RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 SACM1LQ9NTJ5 587 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 DNMT3BQ9UBC3 853 aaKnown RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 CPNE7Q9UBL6 633 aa5.06□□□□□ -1.6
VMP1-205ENST00000587470 NOB1Q9ULX3 412 aaKnown RBP5.06□□□□□ -1.6
VMP1-205ENST00000587470 RGPD8O14715 1765 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms