RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 KCTD13Q8WZ19 329 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 TATDN2Q93075 761 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 ARID3AQ99856 593 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 SLC2A11Q9BYW1 496 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
ACTN4-209ENST00000586538 NMUR1Q9HB89 426 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 ABCC13Q9NSE7 274 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 OSER1Q9NX31 292 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 SLC27A6Q9Y2P4 619 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 HBS1LQ9Y450 684 aaKnown RBP11.79□□□□□ -0.52
ACTN4-209ENST00000586538 EML5Q05BV3 1969 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 WDR87Q6ZQQ6 2873 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 SART1O43290 800 aaKnown RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 GREM1O60565 184 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 FBXO21O94952 628 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 CORO1AP31146 461 aaKnown RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 P2RY2P41231 377 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 DHPSP49366 369 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 PDE4CQ08493 712 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 PPM1JQ5JR12 505 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 KLHL10Q6JEL2 608 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 TMEM270Q6UE05 265 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 LCLAT1Q6UWP7 414 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 ANKS1BQ7Z6G8 1248 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 CEP76Q8TAP6 659 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 NELFBQ8WX92 580 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 IRGQQ8WZA9 623 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 EDEM2Q9BV94 578 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 NUSAP1Q9BXS6 441 aaKnown RBP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 PCDHB4Q9Y5E5 795 aa11.78□□□□□ -0.52
ACTN4-209ENST00000586538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.78□□□□□ -0.52
ACTN4-209ENST00000586538 SLC12A8A0AV02 714 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 DCDC2BA2VCK2 349 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 O00370 1275 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 DCLK1O15075 740 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 MDM4O15151 490 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 MED7O43513 233 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 TIMM44O43615 452 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 AFPP02771 609 aaKnown RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 HNRNPLP14866 589 aaKnown RBP eCLIP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 MARSP56192 900 aaKnown RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 ADIGQ0VDE8 80 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 LRMPQ12912 555 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 MORC3Q14149 939 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 SF3A2Q15428 464 aaKnown RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 CNGA2Q16280 664 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 MEA1Q16626 185 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 MPPE1Q53F39 396 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 STPG1Q5TH74 334 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 LYSMD4Q5XG99 296 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 TTI2Q6NXR4 508 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 ENOSF1Q7L5Y1 443 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 SYT12Q8IV01 421 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 UNC45BQ8IWX7 931 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 DDI1Q8WTU0 396 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 HSFY1Q96LI6 401 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 GABRG3Q99928 467 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 ULBP1Q9BZM6 244 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 POLR3BQ9NW08 1133 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 EVLQ9UI08 416 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-209ENST00000586538 FBXO10Q9UK96 956 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 CTNND2Q9UQB3 1225 aa11.77□□□□□ -0.53
ACTN4-209ENST00000586538 PLXND1Q9Y4D7 1925 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 MYOFQ9NZM1 2061 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 M0QYV0 167 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 GDF9O60383 454 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 SYNCRIPO60506 623 aaKnown RBP11.76□□□□□ -0.53
ACTN4-209ENST00000586538 ADAM23O75077 832 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 HMBSP08397 361 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 ADRB1P08588 477 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 ACADSBP45954 432 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 PGFP49763 221 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 UBE2HP62256 183 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 RPL6Q02878 288 aaKnown RBP11.76□□□□□ -0.53
ACTN4-209ENST00000586538 EMC10Q5UCC4 262 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 DENND1CQ8IV53 801 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 FMNL3Q8IVF7 1028 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 CCDC117Q8IWD4 279 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-209ENST00000586538 UBR7Q8N806 425 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 WFIKKN2Q8TEU8 576 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 IPO4Q8TEX9 1081 aaKnown RBP11.76□□□□□ -0.53
ACTN4-209ENST00000586538 TMEM9BQ9NQ34 198 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 SUSD2Q9UGT4 822 aa11.76□□□□□ -0.53
ACTN4-209ENST00000586538 AGO1Q9UL18 857 aaKnown RBP11.76□□□□□ -0.53
ACTN4-209ENST00000586538 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.76□□□□□ -0.538e-6■■■□□ 15.8
ACTN4-209ENST00000586538 IRAK2O43187 625 aa11.75□□□□□ -0.53
ACTN4-209ENST00000586538 NDUFS2O75306 463 aa11.75□□□□□ -0.53
ACTN4-209ENST00000586538 GABRG2P18507 467 aa11.75□□□□□ -0.53
ACTN4-209ENST00000586538 SLC11A2P49281 568 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms