RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 LHX1P48742 406 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 CCDC6Q16204 474 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 LRRC6Q86X45 466 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 STARD7Q9NQZ5 370 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 NT5C1B-RDH14C9J2C7 533 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 GOLGA8TH3BQL2 631 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 GPR32O75388 356 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 TMEM63AO94886 807 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 ZNF865P0CJ78 1059 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PYGBP11216 843 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PURAQ00577 322 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PDK1Q15118 436 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 HFE2Q6ZVN8 426 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 ZNF669Q96BR6 464 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 ZFATQ9P243 1243 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 MFHAS1Q9Y4C4 1052 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 RNF103O00237 685 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 LTFP02788 710 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 ACAP1Q15027 740 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 TCEAL1Q15170 157 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 NDUFAF2Q8N183 169 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 ARMC2Q8NEN0 867 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 IPMKQ8NFU5 416 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 FNIP1Q8TF40 1166 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PRCCQ92733 491 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 USP6NLQ92738 828 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 MYLPFQ96A32 169 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 CITO14578 2027 aa12.88□□□□□ -0.35
SMARCA4-208ENST00000585799 PMPCBO75439 489 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 FAM155BO75949 473 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 TKTP29401 623 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SP3Q02447 781 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 FAM35AQ86V20 835 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 HTR3CQ8WXA8 447 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 HSFY1Q96LI6 401 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 TRIM56Q9BRZ2 755 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 ADRA1DP25100 572 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 TYK2P29597 1187 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 RPA3P35244 121 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC12A2P55011 1212 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 YWHAHQ04917 246 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 NOMO1Q15155 1222 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC39A12Q504Y0 691 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 RNASEH2BQ5TBB1 312 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 ARFGAP1Q8N6T3 406 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 TMEM174Q8WUU8 243 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 STAMBPL1Q96FJ0 436 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 DUSP16Q9BY84 665 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 RPS6KL1Q9Y6S9 549 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SCAMP3O14828 347 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 CCND3P30281 292 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 HDAC4P56524 1084 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 INHBEP58166 350 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 ACTN3Q08043 901 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 PCSK9Q8NBP7 692 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC35B2Q8TB61 432 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 BHMTQ93088 406 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 WNT8BQ93098 351 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 KCTD15Q96SI1 283 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 AGO3Q9H9G7 860 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 POPDC2Q9HBU9 364 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 SLC45A1Q9Y2W3 748 aa12.87□□□□□ -0.35
SMARCA4-208ENST00000585799 WDR27A2RRH5 827 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 YJEFN3A6XGL0 299 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 E7ENQ6 273 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 MGAT1P26572 445 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 NOS2P35228 1153 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 MATKP42679 507 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 ITGA7Q13683 1181 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 TRPM8Q7Z2W7 1104 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 SAPCD2Q86UD0 394 aa12.86□□□□□ -0.35
SMARCA4-208ENST00000585799 RASSF3Q86WH2 238 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms