RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 BNIPLQ7Z465 357 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 VPS52Q8N1B4 723 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ZNF75CPQ92670 426 aaPredicted RBP17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SLCO1B3Q9NPD5 702 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 FZD10Q9ULW2 581 aa17.1■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 MYO18AQ92614 2054 aaKnown RBP17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 PTGESO14684 152 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 METTL18O95568 372 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 IGHA2P01877 340 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 MT-ND3P03897 115 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 APRTP07741 180 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ADRA1DP25100 572 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SKIV2L2P42285 1042 aaKnown RBP17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SLC8A3P57103 927 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 MRPS5P82675 430 aaKnown RBP17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ZNF534Q76KX8 674 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SLC26A11Q86WA9 606 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 DEFB106AQ8N104 65 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 NT5C3BQ969T7 300 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 OLFM3Q96PB7 478 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 MAGEB5Q9BZ81 275 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 VPS11Q9H270 941 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ECT2Q9H8V3 914 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ZC3H7BQ9UGR2 993 aaKnown RBP17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ZNF180Q9UJW8 692 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 USH1CQ9Y6N9 552 aa17.09■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 HACD1B0YJ81 288 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 IGF2BP3O00425 579 aaKnown RBP eCLIP17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 GABRDO14764 452 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 DGKIO75912 1065 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 NPR3P17342 541 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SULT1E1P49888 294 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 NEK3P51956 506 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ELF3P78545 371 aaPredicted RBP17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 PURAQ00577 322 aaKnown RBP17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ADIGQ0VDE8 80 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SEPT7Q16181 437 aaKnown RBP17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 TWF2Q6IBS0 349 aaKnown RBP17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 BZW1Q7L1Q6 419 aaKnown RBP17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 FAM228AQ86W67 206 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 CFAP36Q96G28 342 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 APOPT1Q96IL0 206 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 PLAC1Q9HBJ0 212 aa17.08■□□□□ 0.33
APOC4-APOC2-201ENST00000585685 SCN10AQ9Y5Y9 1956 aa17.08■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CYB561D2O14569 222 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 DHRS4L1P0CG22 281 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 GOT1P17174 413 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PTPN1P18031 435 aaKnown RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 NOS2P35228 1153 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ARL4AP40617 200 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 RGS2P41220 211 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FAAP100Q0VG06 881 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SEMA5AQ13591 1074 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FAM182AQ5T1J6 154 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TTC39BQ5VTQ0 682 aaPredicted RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TAF2Q6P1X5 1199 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PAQR9Q6ZVX9 377 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PRPF39Q86UA1 669 aaKnown RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 LRRN4Q8WUT4 740 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SERAC1Q96JX3 654 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 NPY6RQ99463 290 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 LPXNO60711 386 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 APOEP02649 317 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CCNB1P14635 433 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CYP2B6P20813 491 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 AMPD1P23109 780 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ETV4P43268 484 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SNCBQ16143 134 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FSCN1Q16658 493 aaKnown RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ICE2Q659A1 982 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 OTOAQ7RTW8 1153 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 LRRC6Q86X45 466 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CHSY1Q86X52 802 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 HACE1Q8IYU2 909 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TFB1MQ8WVM0 346 aaKnown RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 C10orf82Q8WW14 230 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 HTR3CQ8WXA8 447 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 APBB2Q92870 758 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SIGLEC10Q96LC7 697 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 KLF6Q99612 283 aaPredicted RBP17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SLC17A7Q9P2U7 560 aa17.07■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 BEST1O76090 585 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 NQO1P15559 274 aaKnown RBP17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CLEC20AQ6ZU45 233 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ASRGL1Q7L266 308 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FAM131BQ86XD5 332 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PYROXD2Q8N2H3 581 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ZNF398Q8TD17 642 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms