RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 IRF1P10914 325 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TBXAS1P24557 533 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 NDST1P52848 882 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 KCNH2Q12809 1159 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 LRMPQ12912 555 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CBWD6Q4V339 395 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CBWD3Q5JTY5 395 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CBWD5Q5RIA9 395 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 UNC93AQ86WB7 457 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 BBS7Q8IWZ6 715 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ETFBKMTQ8IXQ9 262 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 PHTF2Q8N3S3 785 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SCAMP5Q8TAC9 235 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 OVCA2Q8WZ82 227 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SLC35C1Q96A29 364 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 THAP9Q9H5L6 903 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CALCOCO1Q9P1Z2 691 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SPAG17Q6Q759 2223 aa13.82□□□□□ -0.2
CDK5RAP3-234ENST00000584525 H0Y626 953 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 HOXC11O43248 304 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TRIM16O95361 564 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 HOXB2P14652 356 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 GABRG2P18507 467 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ASPAP45381 313 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SLC8A3P57103 927 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 RING1Q06587 406 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ZNF33AQ06730 810 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 PEAR1Q5VY43 1037 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SDE2Q6IQ49 451 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 RABEPKQ7Z6M1 372 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ACOT1Q86TX2 421 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TMEM25Q86YD3 366 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 PPM1KQ8N3J5 372 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CHCHD4Q8N4Q1 142 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 MINDY1Q8N5J2 469 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TERB1Q8NA31 727 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAXDC2Q96IV6 333 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SPHK2Q9NRA0 654 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 LHX6Q9UPM6 363 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ZFYVE26Q68DK2 2539 aa13.81□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ARHGAP33O14559 1287 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TRIM24O15164 1050 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 NTSR1P30989 418 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SLC5A3P53794 718 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAM193AP78312 1265 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ORC1Q13415 861 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CUL2Q13617 745 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 HSP90AA4PQ58FG1 418 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 GRAMD4Q6IC98 578 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 MIB1Q86YT6 1006 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CHPFQ8IZ52 775 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 OR2I1PQ8NGU4 316 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SMARCD1Q96GM5 515 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 APOBEC3GQ9HC16 384 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CAPN10Q9HC96 672 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAM49BQ9NUQ9 324 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 DNAJC17Q9NVM6 304 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 GMIPQ9P107 970 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CYP8B1Q9UNU6 501 aa13.8□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ABCA7Q8IZY2 2146 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 IGHV1OR15-9A0A0B4J2B8 117 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 A0A1W2PQF6 199 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ZNF217O75362 1048 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 AP1G2O75843 785 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SYPP08247 313 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ADORA2BP29275 332 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 TUBP50607 506 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 MAN2A1Q16706 1144 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SKOR2Q2VWA4 1001 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SNX30Q5VWJ9 437 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 EGFLAMQ63HQ2 1017 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 GBP6Q6ZN66 633 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 RGL4Q8IZJ4 473 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 WBP2Q969T9 261 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 HEXIM2Q96MH2 286 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 HSPA12BQ96MM6 686 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 ACOX2Q99424 681 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 FAM124BQ9H5Z6 455 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 KRT82Q9NSB4 513 aa13.79□□□□□ -0.2
CDK5RAP3-234ENST00000584525 CISHQ9NSE2 258 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms