RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 AOPEPQ8N6M6 819 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 FAM149B1Q96BN6 582 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 NAA15Q9BXJ9 866 aaKnown RBP28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 A0A0A0MRY4 1105 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 NEDD8-MDP1E9PL57 170 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 GFRA3O60609 400 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 KLKB1P03952 638 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 CYBBP04839 570 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 NCAM1P13591 858 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 HOXA6P31267 233 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 SLC6A11P48066 632 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 MRPS21P82921 87 aaKnown RBP28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 NCAPHQ15003 741 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 DENND1CQ8IV53 801 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 ETFBKMTQ8IXQ9 262 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 NAT16Q8N8M0 369 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 RPLP0P6Q8NHW5 317 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 PCMTD1Q96MG8 357 aaPredicted RBP28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 SFMBT1Q9UHJ3 866 aa28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 AGO1Q9UL18 857 aaKnown RBP28.38■■■□□ 2.13
SMARCD2-210ENST00000584400 LGALS16A8MUM7 142 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 E5RJQ4 531 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 CAPN9O14815 690 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 TULP3O75386 442 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 LATS1O95835 1130 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 LMNAP02545 664 aaKnown RBP28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 TDGF1P13385 188 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 TYRP14679 529 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 ZNF18P17022 549 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 TNFRSF4P43489 277 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 ZNF445P59923 1031 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 HSF5Q4G112 596 aaPredicted RBP28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 SYT13Q7L8C5 426 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 C12orf40Q86WS4 652 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 UNC45BQ8IWX7 931 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 CPXM2Q8N436 756 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 CAMKK1Q8N5S9 505 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 CLEC4CQ8WTT0 213 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 EZH1Q92800 747 aaPredicted RBP28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 PPP1R13BQ96KQ4 1090 aa28.37■■■□□ 2.13
SMARCD2-210ENST00000584400 TBC1D3BA6NDS4 549 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 K7EQS6 105 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 CACNG3O60359 315 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 CYP11B1P15538 503 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 UBXN1Q04323 297 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 GRAMD4Q6IC98 578 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 LONP2Q86WA8 852 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 KCNV2Q8TDN2 545 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 IPO4Q8TEX9 1081 aaKnown RBP28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 SERPINB11Q96P15 392 aa28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 FAM207AQ9NSI2 230 aaPredicted RBP28.36■■■□□ 2.13
SMARCD2-210ENST00000584400 PRR23AA6NEV1 266 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 F8VZ95 297 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 K7ESF4 209 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 PAPSS1O43252 624 aaPredicted RBP28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 PNMA6AP0CW24 399 aaPredicted RBP28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 CNR2P34972 360 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 ZNF165P49910 485 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 YWHAZP63104 245 aaKnown RBP28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 KDSRQ06136 332 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 NUGGCQ68CJ6 796 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 PASD1Q8IV76 773 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 USP33Q8TEY7 942 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 SYNCQ9H7C4 482 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 POPDC2Q9HBU9 364 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 DNAJC17Q9NVM6 304 aaKnown RBP28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 CYTH4Q9UIA0 394 aa28.35■■■□□ 2.13
SMARCD2-210ENST00000584400 LILRB5O75023 590 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 GLI1P08151 1106 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 POLR2FP61218 127 aaKnown RBP28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 RING1Q06587 406 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 C2orf27AQ580R0 203 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 EFHC1Q5JVL4 640 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 PKN3Q6P5Z2 889 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 TMEM35BQ8NCS4 154 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 NEK11Q8NG66 645 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 SPAG5Q96R06 1193 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 GANQ9H2C0 597 aa28.34■■■□□ 2.13
SMARCD2-210ENST00000584400 CCDC163A0A0D9SF12 145 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 SEC13P55735 322 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 NNTQ13423 1086 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 SYCP1Q15431 976 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 TRMT11Q7Z4G4 463 aaKnown RBP28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 ZDHHC17Q8IUH5 632 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 PHTF2Q8N3S3 785 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 WDTC1Q8N5D0 677 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 TERB1Q8NA31 727 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 C1orf131Q8NDD1 294 aaKnown RBP28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 ASNSD1Q9NWL6 643 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 SIK3Q9Y2K2 1263 aa28.33■■■□□ 2.13
SMARCD2-210ENST00000584400 CACNA1HO95180 2353 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 SLC11A2P49281 568 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 DGKGP49619 791 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 TBX4P57082 545 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 DMC1Q14565 340 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 SKOR2Q2VWA4 1001 aaPredicted RBP28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 TOGARAM2Q6ZUX3 1019 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 ASCL5Q7RTU5 278 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 ZNF677Q86XU0 584 aa28.32■■■□□ 2.12
SMARCD2-210ENST00000584400 FAM217AQ8IXS0 508 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms