RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	VPS11	Q9H270	941 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RNPEPL1	Q9HAU8	725 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NPHS2	Q9NP85	383 aa		13.71	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BCLAF3	A2AJT9	711 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377		A8MXQ7	604 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PDHX	O00330	501 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	EPHX2	P34913	555 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CMPK2	Q5EBM0	449 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LDLRAD1	Q5T700	205 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZDHHC17	Q8IUH5	632 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF276	Q8N554	614 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LRRC52	Q8N7C0	313 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LRRN4	Q8WUT4	740 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SERAC1	Q96JX3	654 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LPIN3	Q9BQK8	851 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DPEP3	Q9H4B8	488 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CYLD	Q9NQC7	956 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ETNK2	Q9NVF9	386 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DLGAP2	Q9P1A6	1054 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PLXNA1	Q9UIW2	1896 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	STRN	O43815	780 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ATP5H	O75947	161 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TFE3	P19532	575 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DGKD	Q16760	1214 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DUSP28	Q4G0W2	176 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DPP9	Q86TI2	863 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	UNC93A	Q86WB7	457 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	OR6J1	Q8NGC5	347 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CCDC110	Q8TBZ0	833 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	STK32A	Q8WU08	396 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ADAMTS10	Q9H324	1103 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MANSC1	Q9H8J5	431 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ALG13	Q9NP73	1137 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RNF19A	Q9NV58	838 aa		13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-222	ENST00000584377		E7ENQ6	273 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TROVE2	P10155	538 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CYP2F1	P24903	491 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TARS	P26639	723 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZBTB6	Q15916	424 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SOWAHA	Q2M3V2	549 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C9orf131	Q5VYM1	1079 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PRPF39	Q86UA1	669 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CTAGE3P	Q8IX95	158 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	APOPT1	Q96IL0	206 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NRDE2	Q9H7Z3	1164 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TRIP11	Q15643	1979 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377		A6NJR5	290 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	HCRT	O43612	131 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ARHGAP17	Q68EM7	881 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NOTUM	Q6P988	496 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CAND1	Q86VP6	1230 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC26A11	Q86WA9	606 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PPM1N	Q8N819	430 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CLEC4C	Q8WTT0	213 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	UTP4	Q969X6	686 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DHX35	Q9H5Z1	703 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	POPDC2	Q9HBU9	364 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PNPLA8	Q9NP80	782 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PDGFRB	P09619	1106 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TPBGL	P0DKB5	382 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	IMPDH2	P12268	514 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	HOXD8	P13378	290 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ADORA2B	P29275	332 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PTPN9	P43378	593 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ATXN1	P54253	815 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CBLB	Q13191	982 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C9orf57	Q5W0N0	161 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NLRP9	Q7RTR0	991 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LONP2	Q86WA8	852 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LRRC6	Q86X45	466 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PTPRN2	Q92932	1015 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FAM111A	Q96PZ2	611 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	OSMR	Q99650	979 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	APOL6	Q9BWW8	343 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LRMDA	Q9H2I8	198 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NXF3	Q9H4D5	531 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CDHR5	Q9HBB8	845 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	9e-8	■■■■■ 48.4
CSNK1D-222	ENST00000584377	HAO1	Q9UJM8	370 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TTLL3	Q9Y4R7	772 aa		13.69	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KAT6A	Q92794	2004 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C2CD2L	O14523	706 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PEX11A	O75192	247 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CCDC130	P13994	396 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	L1CAM	P32004	1257 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MAGEA6	P43360	314 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NEK3	P51956	506 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GBE1	Q04446	702 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC18A2	Q05940	514 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BST2	Q10589	180 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	OVGP1	Q12889	678 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DPYSL2	Q16555	572 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PLEKHG4	Q58EX7	1191 aa		13.68	□□□□□ -0.22

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