RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 LMAN2Q12907 356 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 KCNJ12Q14500 433 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 RNASE12Q5GAN4 147 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 AARS2Q5JTZ9 985 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A2PQ658T7 463 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 KIRREL2Q6UWL6 708 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 KRT27Q7Z3Y8 459 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 GRASPQ7Z6J2 395 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 SLC44A2Q8IWA5 706 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 SUGP1Q8IWZ8 645 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 CAGE1Q8TC20 777 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 OTUD7AQ8TE49 926 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 SLC22A17Q8WUG5 538 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 BRD8Q9H0E9 1235 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 PABPC3Q9H361 631 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 ITM2CQ9NQX7 267 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 SNX15Q9NRS6 342 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 ASB6Q9NWX5 421 aa6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMARCE1-219ENST00000583294 GCOM1H8Y6P7 765 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 CREB3O43889 395 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 RHOBTB3O94955 611 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 HNRNPCP07910 306 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 DHRS4L1P0CG22 281 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 MYCLP12524 364 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 ZNF37AP17032 561 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 RENBPP51606 427 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 TXNL4AP83876 142 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 ERCC6LQ2NKX8 1250 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 TANGO2Q6ICL3 276 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 MTHFD1LQ6UB35 978 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 OLFML1Q6UWY5 402 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 RRAGAQ7L523 313 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 SLC29A4Q7RTT9 530 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 ZNF354CQ86Y25 554 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 AMER2Q8N7J2 671 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 PNPLA1Q8N8W4 532 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 THAP7Q9BT49 309 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 DUSP26Q9BV47 211 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 CIPCQ9C0C6 399 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 TLK1Q9UKI8 766 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 DAPP1Q9UN19 280 aa6.42□□□□□ -1.38
SMARCE1-219ENST00000583294 M0QZQ0 153 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 ZNF213O14771 459 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 CTIFO43310 598 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 DENND2CQ68D51 928 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 AMIGO2Q86SJ2 522 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 SFTPA1Q8IWL2 248 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 CPXCR1Q8N123 301 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 CLASRPQ8N2M8 674 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM71DQ8N9W8 422 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 SIMC1Q8NDZ2 872 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 CHFRQ96EP1 664 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 MMS19Q96T76 1030 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 MECRQ9BV79 373 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 KLK15Q9H2R5 256 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 ELAC1Q9H777 363 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 ALG13Q9NP73 1137 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 PRDM8Q9NQV8 689 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 VPS45Q9NRW7 570 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 FBXO28Q9NVF7 368 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 SH3BP4Q9P0V3 963 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 SLC17A6Q9P2U8 582 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 SRP68Q9UHB9 627 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 GPR52Q9Y2T5 361 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 ENTPD2Q9Y5L3 495 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 DGKBQ9Y6T7 804 aa6.41□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A18PA6NE21 464 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A16PA6NEW6 464 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A9PA6NNJ1 464 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A5PA8MXJ8 464 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 M0QYT0 321 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 PRAMEF2O60811 474 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A15PP0C7V4 464 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 FAM90A14PP0C7W9 464 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 TMIGD3P0DMS9 266 aaPredicted RBP6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 PEPDP12955 493 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 PTH2RP49190 550 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 CACNA2D1P54289 1103 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 PRKAA2P54646 552 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 INHBCP55103 352 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 DPTQ07507 201 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 CCDC15Q0P6D6 951 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 BIRC3Q13489 604 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 DNASE1L3Q13609 305 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 RAPGEF1Q13905 1077 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 RPS6KA2Q15349 733 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 ANKRD40Q6AI12 368 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 ZNF804AQ7Z570 1209 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 TRABD2AQ86V40 505 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 ARHGEF25Q86VW2 580 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 TERB1Q8NA31 727 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 CSGALNACT1Q8TDX6 532 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 HMGB4Q8WW32 186 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 OVCA2Q8WZ82 227 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 TBC1D5Q92609 795 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 RSC1A1Q92681 617 aa6.4□□□□□ -1.38
SMARCE1-219ENST00000583294 C3orf49Q96BT1 292 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms