RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CCDC25Q86WR0 208 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 PQLC3Q8N755 202 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 SLC7A14Q8TBB6 771 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 RSAD2Q8WXG1 361 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 HERVK_113Q902F9 699 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 NT5C3BQ969T7 300 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 FAF2Q96CS3 445 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 TMEM175Q9BSA9 504 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 TMEM121Q9BTD3 319 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 PCDH9Q9HC56 1237 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 MARCH5Q9NX47 278 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 CALCOCO1Q9P1Z2 691 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 FZD10Q9ULW2 581 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 H7C0C1 242 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 DNALI1O14645 258 aaPredicted RBP15.2■□□□□ 0.02
MKS1-211ENST00000581761 NDC80O14777 642 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 ALDH2P05091 517 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 FYNP06241 537 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 ZSCAN5DPP0CG00 497 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 GRIK1P39086 918 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 ATP5OP48047 213 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 GPS1Q13098 491 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 NME3Q13232 169 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 CTXN3Q4LDR2 81 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 CEP85LQ5SZL2 805 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 FAM171A1Q5VUB5 890 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 SLC9A4Q6AI14 798 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 ZNF280DQ6N043 979 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 DARS2Q6PI48 645 aaKnown RBP15.2■□□□□ 0.02
MKS1-211ENST00000581761 BNIPLQ7Z465 357 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 CEP57Q86XR8 500 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 PSTKQ8IV42 348 aaKnown RBP15.2■□□□□ 0.02
MKS1-211ENST00000581761 SCN4BQ8IWT1 228 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 SCML4Q8N228 414 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 GLIS1Q8NBF1 620 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 PCDH19Q8TAB3 1148 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 P3H4Q92791 437 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 C10orf88Q9H8K7 445 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 PNPLA8Q9NP80 782 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 ABI2Q9NYB9 513 aaPredicted RBP15.2■□□□□ 0.02
MKS1-211ENST00000581761 RRN3Q9NYV6 651 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 HCSTQ9UBK5 93 aa15.2■□□□□ 0.02
MKS1-211ENST00000581761 RBP3P10745 1247 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 NCAM1P13591 858 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 ZFXP17010 805 aaPredicted RBP15.19■□□□□ 0.02
MKS1-211ENST00000581761 CHKAP35790 457 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 ARL4AP40617 200 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 GABPB1Q06547 395 aaPredicted RBP15.19■□□□□ 0.02
MKS1-211ENST00000581761 NFE2Q16621 373 aaPredicted RBP15.19■□□□□ 0.02
MKS1-211ENST00000581761 DENND2CQ68D51 928 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 PM20D1Q6GTS8 502 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 CNKSR3Q6P9H4 555 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 BHLHA9Q7RTU4 235 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 PLD5Q8N7P1 536 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 MAGEB5Q9BZ81 275 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 MTMR10Q9NXD2 777 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 TPX2Q9ULW0 747 aaKnown RBP15.19■□□□□ 0.02
MKS1-211ENST00000581761 PCDHB5Q9Y5E4 795 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 TTC3P53804 2025 aa15.19■□□□□ 0.02
MKS1-211ENST00000581761 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.02
MKS1-211ENST00000581761 NLRC5Q86WI3 1866 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 GOLGA6L10A6NI86 522 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 OR6C75A6NL08 312 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 GRXCR1A8MXD5 290 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 H3BRJ5 948 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 GALTP07902 379 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 RARGP13631 454 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 FGFR3P22607 806 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 SLC5A3P53794 718 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 GDF10P55107 478 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 IFFO1Q0D2I5 559 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 IFRD2Q12894 506 aaPredicted RBP15.18■□□□□ 0.02
MKS1-211ENST00000581761 ELAVL2Q12926 359 aaKnown RBP15.18■□□□□ 0.02
MKS1-211ENST00000581761 EFHC2Q5JST6 749 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 HIBCHQ6NVY1 386 aaPredicted RBP15.18■□□□□ 0.02
MKS1-211ENST00000581761 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.18■□□□□ 0.02
MKS1-211ENST00000581761 ZC3H18Q86VM9 953 aaKnown RBP15.18■□□□□ 0.02
MKS1-211ENST00000581761 UNC45BQ8IWX7 931 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 CRIPAKQ8N1N5 446 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 PYROXD2Q8N2H3 581 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 OR2W6PQ8NHA6 318 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 ADAM32Q8TC27 787 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 EDEM1Q92611 657 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 ARL8AQ96BM9 186 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 FAM161BQ96MY7 647 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 CSPG4P5Q96PW8 444 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 TRIM62Q9BVG3 475 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 GPR62Q9BZJ7 368 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 FOXP3Q9BZS1 431 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 PABPC3Q9H361 631 aaKnown RBP15.18■□□□□ 0.02
MKS1-211ENST00000581761 AAASQ9NRG9 546 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 PIGVQ9NUD9 493 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
MKS1-211ENST00000581761 NFS1Q9Y697 457 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 USP3Q9Y6I4 520 aa15.18■□□□□ 0.02
MKS1-211ENST00000581761 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms