RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CYP2C18P33260 490 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 PBX1P40424 430 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ZNF81P51508 661 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 PNLIPRP1P54315 467 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 EIF4A1P60842 406 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 CLCA4Q14CN2 919 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ACOX1Q15067 660 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 KIAA1614Q5VZ46 1190 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 TTC30AQ86WT1 665 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 NRSN1Q8IZ57 195 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 OTUD7AQ8TE49 926 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 DDB2Q92466 427 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 RUBCNQ92622 972 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 RSPRY1Q96DX4 576 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 WDYHV1Q96HA8 205 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 PBKQ96KB5 322 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 PRR25Q96S07 402 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 WDR24Q96S15 920 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ISCA1Q9BUE6 129 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ARHGEF3Q9NR81 526 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 SH2B3Q9UQQ2 575 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ENTPD2Q9Y5L3 495 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 DNAJC9-AS1A6NH13 148 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 DHHO43323 396 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 SPRY2O43597 315 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 CBFA2T3O75081 653 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 CREB1P16220 341 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 DRD1P21728 446 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 GKP32189 559 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 POLE2P56282 527 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 SOX10P56693 466 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 E2F1Q01094 437 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 PPFIA1Q13136 1202 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 EZH2Q15910 746 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 CYP1B1Q16678 543 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 TMEM196Q5HYL7 178 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 PLAC9Q5JTB6 97 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 LRCH2Q5VUJ6 765 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 RASAL3Q86YV0 1011 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 SCAMP5Q8TAC9 235 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 WDR60Q8WVS4 1066 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 RTKNQ9BST9 563 aa5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 PABPC3Q9H361 631 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-205ENST00000581383 LINC00473A8K010 186 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 C1QL1O75973 258 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 URI1O94763 535 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 CER1O95813 267 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 FGAP02671 866 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 PRKCBP05771 671 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 HSD3B1P14060 373 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 JUPP14923 745 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 ENGP17813 658 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 CTGFP29279 349 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 CCT5P48643 541 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 TPTEP56180 551 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 AP2B1P63010 937 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 MTAPQ13126 283 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 TMEM119Q4V9L6 283 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 ATPAF1Q5TC12 328 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 SUMO4Q6EEV6 95 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 TANGO2Q6ICL3 276 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 Q6ZWC4 215 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 PARS2Q7L3T8 475 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 ZNF551Q7Z340 670 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 P3H2Q8IVL5 708 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 HASPINQ8TF76 798 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 SARAFQ96BY9 339 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 TIMP4Q99727 224 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 TRIM36Q9NQ86 728 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 PRDM8Q9NQV8 689 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 SERTAD4Q9NUC0 356 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 SRP68Q9UHB9 627 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 GABRQQ9UN88 632 aa5.39□□□□□ -1.55
SMCHD1-205ENST00000581383 KAT6AQ92794 2004 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 WDR91A4D1P6 747 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 GCOM1H8Y6P7 765 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 INO80B-WBP1J3KQ70 363 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 M0R3H8 397 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 CES2O00748 559 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 CA12O43570 354 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 PPP6R2O75170 966 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 DLDP09622 509 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 ELFN1P0C7U0 828 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 EBLN1P0CF75 366 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 NDUFB7P17568 137 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 PCSK6P29122 969 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 GSTM5P46439 218 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 ARL4CP56559 192 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 SUMO2P61956 95 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 DEUP1Q05D60 604 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 FOXF2Q12947 444 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 BFSP2Q13515 415 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 CSHL1Q14406 222 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 ST3GAL2Q16842 350 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 BTBD16Q32M84 506 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 L1TD1Q5T7N2 865 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 GRHL2Q6ISB3 625 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 PIK3AP1Q6ZUJ8 805 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 RRAGAQ7L523 313 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms