RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ASIC1P78348 528 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 NCOA4Q13772 614 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 SLC39A14Q15043 492 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 BMT2Q1RMZ1 405 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 C10orf120Q5SQS8 335 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 FAM173BQ6P4H8 233 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 KLHDC10Q6PID8 442 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 SCARA5Q6ZMJ2 495 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 EPM2AIP1Q7L775 607 aaPredicted RBP10.46□□□□□ -0.73
RFFL-208ENST00000581039 NELFCDQ8IXH7 590 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 CRYBG2Q8N1P7 616 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 ENGASEQ8NFI3 743 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 BAHD1Q8TBE0 780 aaPredicted RBP10.46□□□□□ -0.73
RFFL-208ENST00000581039 OSER1Q9NX31 292 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 TOR4AQ9NXH8 423 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 NUDT5Q9UKK9 219 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 SCML2Q9UQR0 700 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 ZNF510Q9Y2H8 683 aa10.46□□□□□ -0.73
RFFL-208ENST00000581039 PLXNB3Q9ULL4 1909 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 A0A1W2PQH9 124 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 MDM4O15151 490 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 CYP26A1O43174 497 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 TNFSF14O43557 240 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 DKK1O94907 266 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 IGLV3-19P01714 112 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 FAM200BP0CF97 657 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 ADORA2BP29275 332 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 CASP4P49662 377 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 AFF3P51826 1226 aaKnown RBP10.45□□□□□ -0.74
RFFL-208ENST00000581039 NDST1P52848 882 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 MFAP3P55082 362 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 BNC1Q01954 994 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 ARID5AQ03989 594 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 ORC1Q13415 861 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 ENPP2Q13822 863 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 TEAD4Q15561 434 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 SGSM1Q2NKQ1 1148 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 C8orf34Q49A92 452 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 CCDC157Q569K6 752 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 ERICH6BQ5W0A0 696 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 Q6ZNB5 142 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 FAM124AQ86V42 546 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 MARCH9Q86YJ5 346 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 SCUBE3Q8IX30 993 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 PDCD7Q8N8D1 485 aaKnown RBP10.45□□□□□ -0.74
RFFL-208ENST00000581039 C12orf29Q8N999 325 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 SNX19Q92543 992 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 JAKMIP2Q96AA8 810 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 GZF1Q9H116 711 aaPredicted RBP10.45□□□□□ -0.74
RFFL-208ENST00000581039 SDCBP2Q9H190 292 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 PCED1AQ9H1Q7 454 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 CUEDC2Q9H467 287 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 FAM49BQ9NUQ9 324 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
RFFL-208ENST00000581039 KBTBD4Q9NVX7 518 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 CGNQ9P2M7 1197 aaKnown RBP10.45□□□□□ -0.74
RFFL-208ENST00000581039 NAGPAQ9UK23 515 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.45□□□□□ -0.74
RFFL-208ENST00000581039 PCDHA5Q9Y5H7 936 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 CELSR3Q9NYQ7 3312 aa10.45□□□□□ -0.74
RFFL-208ENST00000581039 UBE4BO95155 1302 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 A0A087WV48 116 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 FAM149AA5PLN7 773 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 TIMM44O43615 452 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 STC2O76061 302 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 ZIC2O95409 532 aaPredicted RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 PENKP01210 267 aaPredicted RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 C4BPAP04003 597 aaKnown RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 CYBBP04839 570 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 RPN1P04843 607 aaKnown RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 EPHX1P07099 455 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 RALAP11233 206 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 PSEN1P49768 467 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 COG7P83436 770 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 C19orf57Q0VDD7 668 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 ZNF234Q14588 700 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 GEN1Q17RS7 908 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 KIF19Q2TAC6 998 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 FYB2Q5VWT5 728 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 GPRIN1Q7Z2K8 1008 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 ANKS1BQ7Z6G8 1248 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 CACUL1Q86Y37 369 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 C12orf56Q8IXR9 622 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 IQUBQ8NA54 791 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 C1orf216Q8TAB5 229 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 COL26A1Q96A83 441 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 ELMO3Q96BJ8 720 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 CDK5RAP1Q96SZ6 601 aaKnown RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 HNRNPABQ99729 332 aaKnown RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 DCLK3Q9C098 648 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 CIPCQ9C0C6 399 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 NMUR1Q9HB89 426 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 ELOVL2Q9NXB9 296 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 TFIP11Q9UBB9 837 aaKnown RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 BTBD3Q9Y2F9 522 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 SNX11Q9Y5W9 270 aa10.44□□□□□ -0.74
RFFL-208ENST00000581039 MORC2Q9Y6X9 1032 aaPredicted RBP10.44□□□□□ -0.74
RFFL-208ENST00000581039 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms