RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GJA1P17302 382 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 MSNP26038 577 aaKnown RBP14.89□□□□□ -0.03
SKA2-205ENST00000580541 FLT3P36888 993 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 SLC1A1P43005 524 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 HARS2P49590 506 aaKnown RBP14.89□□□□□ -0.03
SKA2-205ENST00000580541 SULT1E1P49888 294 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 DEUP1Q05D60 604 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 RING1Q06587 406 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 ARL13BQ3SXY8 428 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 SYPL2Q5VXT5 272 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 NUGGCQ68CJ6 796 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 SYCE1Q8N0S2 351 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 CELF5Q8N6W0 485 aaKnown RBP14.89□□□□□ -0.03
SKA2-205ENST00000580541 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 JOSD2Q8TAC2 188 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 ING5Q8WYH8 240 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 SMARCD2Q92925 531 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 PIWIL1Q96J94 861 aaKnown RBP14.89□□□□□ -0.03
SKA2-205ENST00000580541 NPY6RQ99463 290 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 PHF7Q9BWX1 381 aaPredicted RBP14.89□□□□□ -0.03
SKA2-205ENST00000580541 WDCPQ9H6R7 721 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 DDIT4Q9NX09 232 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 RASAL2Q9UJF2 1139 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 LSM7Q9UK45 103 aaKnown RBP14.89□□□□□ -0.03
SKA2-205ENST00000580541 ARHGAP26Q9UNA1 814 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.89□□□□□ -0.03
SKA2-205ENST00000580541 ANAPC1Q9H1A4 1944 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 NOTCH4Q99466 2003 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 SLC12A8A0AV02 714 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 ENDOD1O94919 500 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 TBX18O95935 607 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 APOEP02649 317 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 CEBPBP17676 345 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 CCR1P32246 355 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 AIF1P55008 147 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 TBX4P57082 545 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 ATP11AP98196 1134 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 NME3Q13232 169 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 TRIP4Q15650 581 aaPredicted RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 SMAD2Q15796 467 aaKnown RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 HADHQ16836 314 aaKnown RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 CCDC14Q49A88 953 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 BRMS1LQ5PSV4 323 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 PTCRAQ6ISU1 281 aaPredicted RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 MTSS1LQ765P7 747 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 MIB1Q86YT6 1006 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 ARID3BQ8IVW6 561 aaPredicted RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 NPAS3Q8IXF0 933 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 EMC1Q8N766 993 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 NIPA2Q8N8Q9 360 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 CENPIQ92674 756 aaPredicted RBP14.88□□□□□ -0.03
SKA2-205ENST00000580541 NXPE3Q969Y0 559 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 PLD4Q96BZ4 506 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 CFAP57Q96MR6 1250 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 CYP2S1Q96SQ9 504 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 LACRTQ9GZZ8 138 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 RNF38Q9H0F5 515 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 POMKQ9H5K3 350 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 ZFP14Q9HCL3 533 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 OBP2AQ9NY56 170 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 NUDT5Q9UKK9 219 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 GUCA1BQ9UMX6 200 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 SH3BP1Q9Y3L3 701 aa14.88□□□□□ -0.03
SKA2-205ENST00000580541 GRXCR2A6NFK2 248 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 SLC9A3R1O14745 358 aaPredicted RBP14.87□□□□□ -0.03
SKA2-205ENST00000580541 PROSCO94903 275 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 LAMP2P13473 410 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 TCF3P15923 654 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 MAN1A1P33908 653 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 PCK1P35558 622 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 PGFP49763 221 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 MESDQ14696 234 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 PPP2R5DQ14738 602 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 ATP6V0D2Q8N8Y2 350 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
SKA2-205ENST00000580541 KIAA1524Q8TCG1 905 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 FAM172AQ8WUF8 416 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 ALS2CR12Q96Q35 445 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 TBCBQ99426 244 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 DDX50Q9BQ39 737 aaKnown RBP14.87□□□□□ -0.03
SKA2-205ENST00000580541 KLF16Q9BXK1 252 aaPredicted RBP14.87□□□□□ -0.03
SKA2-205ENST00000580541 TRPV4Q9HBA0 871 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 OSGEPQ9NPF4 335 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 LZTFL1Q9NQ48 299 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 THG1LQ9NWX6 298 aaKnown RBP14.87□□□□□ -0.03
SKA2-205ENST00000580541 THEGQ9P2T0 379 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 SFMBT1Q9UHJ3 866 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 CPQQ9Y646 472 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 SZT2Q5T011 3432 aa14.87□□□□□ -0.03
SKA2-205ENST00000580541 MACROD2A1Z1Q3 448 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 RCCD1A6NED2 376 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 IRAK2O43187 625 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 PRPSAP2O60256 369 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 GJB6O95452 261 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 IGLV3-25P01717 112 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 SLC11A2P49281 568 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 CDO1Q16878 200 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms