RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ACAT1P24752 427 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SERPINB4P48594 390 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 RPS6KA3P51812 740 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 GTF2A2P52657 109 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 CLNS1AP54105 237 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 NAA25Q14CX7 972 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 LINC01465Q8N7H1 131 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 MAGEC3Q8TD91 643 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 LRMDAQ9H2I8 198 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 MROH8Q9H579 483 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 CPSF2Q9P2I0 782 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 C15orf41Q9Y2V0 281 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 PPME1Q9Y570 386 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 MYO18AQ92614 2054 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SLC15A5A6NIM6 579 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ASB14A6NK59 587 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 SNAI1O95863 264 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 C1QAP02745 245 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 MYL2P10916 166 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ALADP13716 330 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ETV4P43268 484 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 SESN2P58004 480 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 CCDC15Q0P6D6 951 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 FAM187BQ17R55 369 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 BOLA3Q53S33 107 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 FAM47CQ5HY64 1035 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 SH2D5Q6ZV89 423 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 APOPT1Q96IL0 206 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 FAM167BQ9BTA0 163 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 TRIM55Q9BYV6 548 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 KLC2Q9H0B6 622 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 DENND2DQ9H6A0 471 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 KCNK13Q9HB14 408 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 PAK5Q9P286 719 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ZNF232Q9UNY5 417 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 KCNH4Q9UQ05 1017 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 C2CD2Q9Y426 696 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ANK1P16157 1881 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 RECQL4O94761 1208 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 L1CAMP32004 1257 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 NEK3P51956 506 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ARFIP2P53365 341 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 SLC18A1P54219 525 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 MRPS5P82675 430 aaKnown RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 PPIL2Q13356 520 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 CTC1Q2NKJ3 1217 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 TRIM68Q6AZZ1 485 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 C16orf46Q6P387 395 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 SLC26A11Q86WA9 606 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 PPTC7Q8NI37 304 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 ADAM32Q8TC27 787 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 MICAL1Q8TDZ2 1067 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 KCTD15Q96SI1 283 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 TBCBQ99426 244 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 NFKBIZQ9BYH8 718 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 FRMD8P1Q9BZ68 369 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 C20orf27Q9GZN8 174 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 VRTNQ9H8Y1 702 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 EBF2Q9HAK2 575 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 NOP53Q9NZM5 478 aaKnown RBP10.86□□□□□ -0.67
TOP3A-209ENST00000580095 AP4E1Q9UPM8 1137 aa10.86□□□□□ -0.67
TOP3A-209ENST00000580095 HMX2A2RU54 273 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 A6NJR5 290 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TM9SF1O15321 606 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CHADO15335 359 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SKAP2O75563 359 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 NDUFV1P49821 464 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CRYMQ14894 314 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ACAP1Q15027 740 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 PKDCCQ504Y2 493 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 DSTYKQ6XUX3 929 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ZNF534Q76KX8 674 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 DPP9Q86TI2 863 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 GPRC5AQ8NFJ5 357 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 FBXO27Q8NI29 283 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TMEM40Q8WWA1 233 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 NUDCD1Q96RS6 583 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 VPS11Q9H270 941 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 MTMR10Q9NXD2 777 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 WDR27A2RRH5 827 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 PDHXO00330 501 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 C2CD2LO14523 706 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CCND1P24385 295 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TKTP29401 623 aaKnown RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TMPRSS15P98073 1019 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 HIC1Q14526 733 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 RASA2Q15283 850 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CHI3L2Q15782 390 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TLDC1Q6P9B6 456 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TMEM110Q86TL2 294 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ARID3BQ8IVW6 561 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 NDUFAF2Q8N183 169 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 VPS52Q8N1B4 723 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ATXN7L3BQ96GX2 97 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CSPG4P5Q96PW8 444 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SLC4A5Q9BY07 1137 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms