RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 MDM4O15151 490 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 GREM1O60565 184 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 HMBSP08397 361 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 GABRG2P18507 467 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 CORO1AP31146 461 aaKnown RBP14.38□□□□□ -0.11
GGA3-208ENST00000579743 WASP42768 502 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 HARS2P49590 506 aaKnown RBP14.38□□□□□ -0.11
GGA3-208ENST00000579743 PGFP49763 221 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 NOVA1P51513 510 aaKnown RBP14.38□□□□□ -0.11
GGA3-208ENST00000579743 TKTL1P51854 596 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 ZNF445P59923 1031 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 BST2Q10589 180 aaKnown RBP14.38□□□□□ -0.11
GGA3-208ENST00000579743 CUL2Q13617 745 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 MAP7D1Q3KQU3 841 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 TRIM61Q5EBN2 209 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 SYCP2LQ5T4T6 812 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 EGFLAMQ63HQ2 1017 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 Q6ZNB5 142 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 ARMCX6Q7L4S7 300 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 SCD5Q86SK9 330 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 SIX6OS1Q8N1H7 587 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
GGA3-208ENST00000579743 GOLGA1Q92805 767 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 BHMTQ93088 406 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 WBP2Q969T9 261 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 PLD4Q96BZ4 506 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 DHTKD1Q96HY7 919 aaPredicted RBP14.38□□□□□ -0.11
GGA3-208ENST00000579743 SLC2A11Q9BYW1 496 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 SLC32A1Q9H598 525 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 ZDHHC4Q9NPG8 344 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 COQ4Q9Y3A0 265 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 SPTBN2O15020 2390 aa14.38□□□□□ -0.11
GGA3-208ENST00000579743 SLC12A8A0AV02 714 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 TIMM44O43615 452 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 SYNCRIPO60506 623 aaKnown RBP14.37□□□□□ -0.11
GGA3-208ENST00000579743 CFIP05156 583 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 SETSIPP0DME0 302 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 VDRP11473 427 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 HNRNPLP14866 589 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■■□ 23.5
GGA3-208ENST00000579743 IRX4P78413 519 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 GFPT1Q06210 699 aaPredicted RBP14.37□□□□□ -0.11
GGA3-208ENST00000579743 DUOXA1Q1HG43 343 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 GOLGA7BQ2TAP0 167 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 UAP1L1Q3KQV9 507 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 RAB41Q5JT25 222 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 N4BP2L1Q5TBK1 243 aaPredicted RBP14.37□□□□□ -0.11
GGA3-208ENST00000579743 ANKRD40Q6AI12 368 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 PSAPL1Q6NUJ1 521 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 DENND1CQ8IV53 801 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 HDDC3Q8N4P3 179 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 DDI1Q8WTU0 396 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 FOXJ1Q92949 421 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 TATDN2Q93075 761 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 CEP63Q96MT8 703 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 GABRG3Q99928 467 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 PLK2Q9NYY3 685 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 SLC6A14Q9UN76 642 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 SLC27A6Q9Y2P4 619 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 DMXL1Q9Y485 3027 aa14.37□□□□□ -0.11
GGA3-208ENST00000579743 ABCA7Q8IZY2 2146 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 BICDL2A1A5D9 508 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 CEACAM1P13688 526 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 GNSP15586 552 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 CSRP1P21291 193 aaKnown RBP14.36□□□□□ -0.11
GGA3-208ENST00000579743 RDXP35241 583 aaKnown RBP14.36□□□□□ -0.11
GGA3-208ENST00000579743 EIF4HQ15056 248 aaKnown RBP14.36□□□□□ -0.11
GGA3-208ENST00000579743 STILQ15468 1287 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 PM20D1Q6GTS8 502 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 KIAA1324Q6UXG2 1013 aaKnown RBP14.36□□□□□ -0.11
GGA3-208ENST00000579743 CPXM2Q8N436 756 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 NT5C1BQ96P26 610 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 ARID3AQ99856 593 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 ABCC13Q9NSE7 274 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 SUSD2Q9UGT4 822 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 TSPAN16Q9UKR8 245 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 HBS1LQ9Y450 684 aaKnown RBP14.36□□□□□ -0.11
GGA3-208ENST00000579743 NUP205Q92621 2012 aa14.36□□□□□ -0.11
GGA3-208ENST00000579743 A0A1W2PQF6 199 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 ANTXRLA6NF34 631 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 PRRT4C9JH25 899 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 TRIM24O15164 1050 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 PENKP01210 267 aaPredicted RBP14.35□□□□□ -0.11
GGA3-208ENST00000579743 SYPP08247 313 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 PAEPP09466 180 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 PTGER3P43115 390 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 ZNF33AQ06730 810 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 PDE4CQ08493 712 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 LRMPQ12912 555 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 CBWD6Q4V339 395 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 MPPE1Q53F39 396 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 CBWD3Q5JTY5 395 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 WDR45BQ5MNZ6 344 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 CBWD5Q5RIA9 395 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 SH3PXD2AQ5TCZ1 1133 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 SLC23A3Q6PIS1 610 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
GGA3-208ENST00000579743 ANKS1BQ7Z6G8 1248 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms