RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 GPC5P78333 572 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 FCHO2Q0JRZ9 810 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 TRIP4Q15650 581 aaPredicted RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 C10orf76Q5T2E6 689 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 PLEKHA7Q6IQ23 1121 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 DCUN1D2Q6PH85 259 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 HTR3DQ70Z44 454 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 UNC45BQ8IWX7 931 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 PLD4Q96BZ4 506 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 ZNF653Q96CK0 615 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 BRD9Q9H8M2 597 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 MRPL47Q9HD33 250 aaKnown RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 DUS2Q9NX74 493 aaKnown RBP16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 MYO1AQ9UBC5 1043 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 NENFQ9UMX5 172 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 ZNF510Q9Y2H8 683 aa16.23■□□□□ 0.19
SLC6A4-205ENST00000579221 TCRBV5S1A1TA0A578 114 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 STC2O76061 302 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 H2AFZP0C0S5 128 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 SRFP11831 508 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 PDGFRAP16234 1089 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 ABCB4P21439 1286 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 IFNAR2P48551 515 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 HARS2P49590 506 aaKnown RBP16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 GALCP54803 685 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 PFKPQ01813 784 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 NNTQ13423 1086 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 MAMLD1Q13495 774 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 PDGFRLQ15198 375 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 SLC25A52Q3SY17 297 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 H2AFVQ71UI9 128 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 TAC4Q86UU9 113 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 UBALD2Q8IYN6 164 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 OSCP1Q8WVF1 389 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 RXFP2Q8WXD0 754 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 IRF7Q92985 503 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 NPY6RQ99463 290 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 THAP2Q9H0W7 228 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 FAM204AQ9H8W3 233 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 TLR6Q9Y2C9 796 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 SCINQ9Y6U3 715 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 TCF20Q9UGU0 1960 aaKnown RBP16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 COL6A3P12111 3177 aa16.22■□□□□ 0.19
SLC6A4-205ENST00000579221 C2CD4BA6NLJ0 364 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 M0QYT0 321 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 MSI1O43347 362 aaKnown RBP16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 GJB6O95452 261 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SLC2A3P11169 496 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 DESP17661 470 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SDC4P31431 198 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 RFC1P35251 1148 aaPredicted RBP16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 FLT3P36888 993 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SULT1E1P49888 294 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 RING1Q06587 406 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SPA17Q15506 151 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 NUGGCQ68CJ6 796 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SND1Q7KZF4 910 aaKnown RBP eCLIP16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 EMC1Q8N766 993 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 JOSD2Q8TAC2 188 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 RIN3Q8TB24 985 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 ADAM32Q8TC27 787 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 RNF34Q969K3 372 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 NT5C3BQ969T7 300 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 OTUB2Q96DC9 234 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 PGAP3Q96FM1 320 aaPredicted RBP16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 TRPV5Q9NQA5 729 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SLC2A4RGQ9NR83 387 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 DDIT4Q9NX09 232 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 SLC12A6Q9UHW9 1150 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 MUTYHQ9UIF7 546 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 DUSP12Q9UNI6 340 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 EPN1Q9Y6I3 576 aaPredicted RBP16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 DENND4CQ5VZ89 1909 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
SLC6A4-205ENST00000579221 OBSL1O75147 1896 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 MYO16Q9Y6X6 1858 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 XIRP2A4UGR9 3374 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 EIF3CLB5ME19 914 aaKnown RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 IRAK2O43187 625 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 ATMINO43313 823 aaPredicted RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 NARSO43776 548 aaKnown RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 IGLV3-25P01717 112 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 CYP1A2P05177 515 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 GPD1P21695 349 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 CORO1AP31146 461 aaKnown RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 MAGEA1P43355 309 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 PITX1P78337 314 aaPredicted RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 DEUP1Q05D60 604 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 NR1H3Q13133 447 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 NME3Q13232 169 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 EIF4EBP2Q13542 120 aaPredicted RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 CCDC14Q49A88 953 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 ADGRG2Q8IZP9 1017 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 CTNNBL1Q8WYA6 563 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms