RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SLMAPQ14BN4 828 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 PPP1R7Q15435 360 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 RTP2Q5QGT7 225 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 CCDC121Q6ZUS5 278 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 ARCQ7LC44 396 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 FAM131BQ86XD5 332 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 EDEM1Q92611 657 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 CENPIQ92674 756 aaPredicted RBP21.06■□□□□ 0.96
SMG8-203ENST00000578922 POPDC2Q9HBU9 364 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 GRHL1Q9NZI5 618 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 DGKIO75912 1065 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 FYNP06241 537 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 KRT17Q04695 432 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 NME3Q13232 169 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 CCNG2Q16589 344 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 SLC25A52Q3SY17 297 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 PPP6R3Q5H9R7 873 aaPredicted RBP21.05■□□□□ 0.96
SMG8-203ENST00000578922 C6orf118Q5T5N4 469 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 DCP1BQ8IZD4 617 aaKnown RBP21.05■□□□□ 0.96
SMG8-203ENST00000578922 CCDC185Q8N715 623 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 DNPEPQ9ULA0 475 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 NLRC5Q86WI3 1866 aa21.05■□□□□ 0.96
SMG8-203ENST00000578922 VGLL3A8MV65 326 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 M0QYT0 321 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 NOS2P35228 1153 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 PTPN7P35236 360 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 ALDH7A1P49419 539 aaKnown RBP21.04■□□□□ 0.96
SMG8-203ENST00000578922 GPR15P49685 360 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 BOLA3Q53S33 107 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 SPOUT1Q5T280 376 aaKnown RBP21.04■□□□□ 0.96
SMG8-203ENST00000578922 ERMARDQ5T6L9 678 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 OTUD1Q5VV17 481 aaPredicted RBP21.04■□□□□ 0.96
SMG8-203ENST00000578922 PRUNE1Q86TP1 453 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 FBXO25Q8TCJ0 367 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 TMEM175Q9BSA9 504 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 STMN4Q9H169 189 aaPredicted RBP21.04■□□□□ 0.96
SMG8-203ENST00000578922 CAPN15O75808 1086 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 NCAM1P13591 858 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 FGFR3P22607 806 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 RFC2P35250 354 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 DPYSL3Q14195 570 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 GKAP1Q5VSY0 366 aaPredicted RBP21.04■□□□□ 0.96
SMG8-203ENST00000578922 ZNF280DQ6N043 979 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 CACNA2D3Q8IZS8 1091 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 SLC7A14Q8TBB6 771 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 CABS1Q96KC9 395 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 SLC2A13Q96QE2 648 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 TMPRSS4Q9NRS4 437 aa21.04■□□□□ 0.96
SMG8-203ENST00000578922 LIASO43766 372 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 LTFP02788 710 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 VPS41P49754 854 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 DDR2Q16832 855 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 FBXW10Q5XX13 1052 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 RSPO2Q6UXX9 243 aaPredicted RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 BHLHA9Q7RTU4 235 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 TAX1BP1Q86VP1 789 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 TTC9BQ8N6N2 239 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 ATAD1Q8NBU5 361 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 ATL2Q8NHH9 583 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 SEC16BQ96JE7 1060 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 XPO6Q96QU8 1125 aaKnown RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 MAK16Q9BXY0 300 aaKnown RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 DHX35Q9H5Z1 703 aaKnown RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 HOMER3Q9NSC5 361 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 PTPRDP23468 1912 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 AGTP01019 485 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 CPB1P15086 417 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 RPL21P46778 160 aaKnown RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 ARSEP51690 589 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 SLC5A3P53794 718 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 MRPL58Q14197 206 aaKnown RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 TAZQ16635 292 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 SWT1Q5T5J6 900 aaKnown RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 PRSS55Q6UWB4 352 aaPredicted RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 FAM43BQ6ZT52 329 aaPredicted RBP21.03■□□□□ 0.96
SMG8-203ENST00000578922 GSTA5Q7RTV2 222 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 CWH43Q9H720 699 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 C10orf88Q9H8K7 445 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 PCDH18Q9HCL0 1135 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 STAP1Q9ULZ2 295 aa21.03■□□□□ 0.96
SMG8-203ENST00000578922 SOAT2O75908 522 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 MMP13P45452 471 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 STRADAQ7RTN6 431 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 CPLX4Q7Z7G2 160 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 GPR152Q8TDT2 470 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 TEKT4Q8WW24 435 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 TOP1MTQ969P6 601 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 CHMP6Q96FZ7 201 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 NPY6RQ99463 290 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 ASIC3Q9UHC3 531 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 AP4E1Q9UPM8 1137 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 ZNF148Q9UQR1 794 aa21.02■□□□□ 0.96
SMG8-203ENST00000578922 RARGP13631 454 aa21.02■□□□□ 0.95
SMG8-203ENST00000578922 OTUD4Q01804 1114 aaKnown RBP21.02■□□□□ 0.95
SMG8-203ENST00000578922 DEUP1Q05D60 604 aa21.02■□□□□ 0.95
SMG8-203ENST00000578922 NPNTQ6UXI9 565 aa21.02■□□□□ 0.95
SMG8-203ENST00000578922 BBS12Q6ZW61 710 aa21.02■□□□□ 0.95
SMG8-203ENST00000578922 OTOP2Q7RTS6 562 aa21.02■□□□□ 0.95
SMG8-203ENST00000578922 PYROXD2Q8N2H3 581 aa21.02■□□□□ 0.95
SMG8-203ENST00000578922 ACTL9Q8TC94 416 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms