RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 RGS5O15539 181 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CBFA2T3O75081 653 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CYP1A1P04798 512 aaPredicted RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 RAG1P15918 1043 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CD151P48509 253 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 HMGCS2P54868 508 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 KCNT1Q5JUK3 1230 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 ARMC4Q5T2S8 1044 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 LRRN4CLQ8ND94 238 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 AGAP11Q8TF27 550 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 MTERF3Q96E29 417 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 GPR63Q9BZJ6 419 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 PAIP1Q9H074 479 aaKnown RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 DDIT4Q9NX09 232 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 TMEM114B3SHH9 223 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 NCAM1P13591 858 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 SMAD1Q15797 465 aaKnown RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 DENND5BQ6ZUT9 1274 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 SLITRK1Q96PX8 696 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CRTAMO95727 393 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 DRD4P21917 467 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 TRIP4Q15650 581 aaPredicted RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 SLC20A1Q8WUM9 679 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 SGF29Q96ES7 293 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 WDCPQ9H6R7 721 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 ADAM28Q9UKQ2 775 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 M0QYT0 321 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 C2CD2LO14523 706 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 ALDH1A1P00352 501 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 AMPD2Q01433 879 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CYP51A1Q16850 503 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 MARCH10Q8NA82 808 aaPredicted RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 GANCQ8TET4 914 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 DNAJC18Q9H819 358 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 FANCEQ9HB96 536 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 GPAMQ9HCL2 828 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 MRASO14807 208 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 IMPDH2P12268 514 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 MTMR2Q13614 643 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 FRG1Q14331 258 aaKnown RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 DGKDQ16760 1214 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 IL31Q6EBC2 164 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 EID3Q8N140 333 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 ABHD8Q96I13 439 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 PPP1R10Q96QC0 940 aaKnown RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 UTP6Q9NYH9 597 aaKnown RBP11.03□□□□□ -0.64
SEC22B-201ENST00000578049 NDUFAF1Q9Y375 327 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 C2CD2Q9Y426 696 aa11.03□□□□□ -0.64
SEC22B-201ENST00000578049 DPYSL4O14531 572 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ZNF862O60290 1169 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ITGB3P05106 788 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 TAB1Q15750 504 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ZPBP2Q6X784 338 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ARHGEF19Q8IW93 802 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 IQCKQ8N0W5 287 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 UBA3Q8TBC4 463 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 FAM120BQ96EK7 910 aaKnown RBP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 KCTD14Q9BQ13 255 aaPredicted RBP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 DAPK2Q9UIK4 370 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 A0A0G2JLW4 131 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 PDE9AO76083 593 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 KRT6AP02538 564 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 KRT6BP04259 564 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ANXA6P08133 673 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 KRT6CP48668 564 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 SPANXN2Q5MJ10 180 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 CHSY1Q86X52 802 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 CLVS1Q8IUQ0 354 aaPredicted RBP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 STARD8Q92502 1023 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 RAD21L1Q9H4I0 556 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 PLGRKTQ9HBL7 147 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 DPP3Q9NY33 737 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 C6orf203Q9P0P8 240 aaPredicted RBP11.02□□□□□ -0.64
SEC22B-201ENST00000578049 CRLS1Q9UJA2 301 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 VANGL2Q9ULK5 521 aa11.02□□□□□ -0.64
SEC22B-201ENST00000578049 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 CYTH3O43739 400 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 PDGFRBP09619 1106 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 ACCSLQ4AC99 568 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 FAXCQ5TGI0 409 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 NMRAL1Q9HBL8 299 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 CENPXA8MT69 81 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 H7C0S8 307 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 CHADO15335 359 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 CCT8P50990 548 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 GLRA4Q5JXX5 417 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 MFSD14CQ5VZR4 134 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 MYO1HQ8N1T3 1032 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 PNMA5Q96PV4 448 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 MAPRE3Q9UPY8 281 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 MMP13P45452 471 aa11.02□□□□□ -0.65
SEC22B-201ENST00000578049 PCSK7Q16549 785 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms