RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 ARHGAP17Q68EM7 881 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 GBP6Q6ZN66 633 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 ARMCX6Q7L4S7 300 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 RRAGAQ7L523 313 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 PGBD3Q8N328 593 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 ZMIZ2Q8NF64 920 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 HMGB4Q8WW32 186 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 JAKMIP2Q96AA8 810 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 ZFRQ96KR1 1074 aaKnown RBP16.84■□□□□ 0.29
VAPA-204ENST00000577901 FAM81BQ96LP2 452 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 NUSAP1Q9BXS6 441 aaKnown RBP16.84■□□□□ 0.29
VAPA-204ENST00000577901 DUSP16Q9BY84 665 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 CHORDC1Q9UHD1 332 aaPredicted RBP16.84■□□□□ 0.29
VAPA-204ENST00000577901 WASF3Q9UPY6 502 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 PCDHB4Q9Y5E5 795 aa16.84■□□□□ 0.29
VAPA-204ENST00000577901 GTPBP10A4D1E9 387 aaKnown RBP16.83■□□□□ 0.28
VAPA-204ENST00000577901 VDRP11473 427 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 CD19P15391 556 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 SPINK2P20155 84 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 MAP7D1Q3KQU3 841 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 VWA3BQ502W6 1294 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 SGO2Q562F6 1265 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 BTBD8Q5XKL5 378 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 TMEM270Q6UE05 265 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 THADAQ6YHU6 1953 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 ENOSF1Q7L5Y1 443 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 SYT12Q8IV01 421 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 ETFBKMTQ8IXQ9 262 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 PHTF2Q8N3S3 785 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 NAT16Q8N8M0 369 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 DEFB124Q8NES8 71 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 SCAMP5Q8TAC9 235 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 NUP205Q92621 2012 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 TUBGCP2Q9BSJ2 902 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 TMEM74BQ9NUR3 256 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 IL37Q9NZH6 218 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 SH3BP1Q9Y3L3 701 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 NFE2L3Q9Y4A8 694 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 ZZEF1O43149 2961 aa16.83■□□□□ 0.28
VAPA-204ENST00000577901 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 SPEGQ15772 3267 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 TBC1D3BA6NDS4 549 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 KCNJ18B7U540 433 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 HOXC11O43248 304 aaPredicted RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 TULP3O75386 442 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 PAEPP09466 180 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 PTMSP20962 102 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 EEF1GP26641 437 aaKnown RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 MAPK8P45983 427 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 KCNJ12Q14500 433 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 PREPLQ4J6C6 727 aaPredicted RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 HSP90AA4PQ58FG1 418 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 SPDYCQ5MJ68 293 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 SNX30Q5VWJ9 437 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 ARHGEF19Q8IW93 802 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 BBS7Q8IWZ6 715 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 UBR7Q8N806 425 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 ANKRD52Q8NB46 1076 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 KCNV2Q8TDN2 545 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 ADAM33Q9BZ11 813 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 UBXN6Q9BZV1 441 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 NDST4Q9H3R1 872 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 CCSER2Q9H7U1 834 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 UBE2TQ9NPD8 197 aaPredicted RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 SAMSN1Q9NSI8 373 aaKnown RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 TMEM63CQ9P1W3 806 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 DEC1Q9P2X7 70 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 HESX1Q9UBX0 185 aa16.82■□□□□ 0.28
VAPA-204ENST00000577901 RALYQ9UKM9 306 aaKnown RBP16.82■□□□□ 0.28
VAPA-204ENST00000577901 ATXN2Q99700 1313 aaKnown RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 FAM92AA1XBS5 289 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 ENGP17813 658 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 SLC9A1P19634 815 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 ACO1P21399 889 aaKnown RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 DPP6P42658 865 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 TUBP50607 506 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 MFAP3P55082 362 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 TCP11X2Q5H9J9 407 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 LYSMD4Q5XG99 296 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 TRIM65Q6PJ69 517 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 TRMT11Q7Z4G4 463 aaKnown RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 TMEM25Q86YD3 366 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 ZNF513Q8N8E2 541 aaPredicted RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 KDF1Q8NAX2 398 aaPredicted RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 KAT5Q92993 513 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 NACA2Q9H009 215 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 NAT10Q9H0A0 1025 aaKnown RBP16.81■□□□□ 0.28
VAPA-204ENST00000577901 SPHK2Q9NRA0 654 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 GMIPQ9P107 970 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 PILRBQ9UKJ0 227 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 ZMIZ1Q9ULJ6 1067 aa16.81■□□□□ 0.28
VAPA-204ENST00000577901 HHLA1C9JL84 531 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms