RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 MTMR3Q13615 1198 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 SCYL2Q6P3W7 929 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 TMEM184AQ6ZMB5 413 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 TAC4Q86UU9 113 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 WDCPQ9H6R7 721 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
SS18-206ENST00000577572 MAN1C1Q9NR34 630 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 HOMER3Q9NSC5 361 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 OSER1Q9NX31 292 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 DNMT3LQ9UJW3 386 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.13
SS18-206ENST00000577572 HCFC2Q9Y5Z7 792 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 SRGAP2O75044 1071 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 F11P03951 625 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 KRT1P04264 644 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 SRGAP2BP0DMP2 458 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 PYGMP11217 842 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 PTPN2P17706 415 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 CXCR5P32302 372 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 ADRA1BP35368 520 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 MARCKSL1P49006 195 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 HCAR3P49019 387 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 ARSEP51690 589 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 COG7P83436 770 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 NME3Q13232 169 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 KCNC3Q14003 757 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 TRIP4Q15650 581 aaPredicted RBP15.88■□□□□ 0.13
SS18-206ENST00000577572 TFDP3Q5H9I0 405 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 EFHC2Q5JST6 749 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 SH3PXD2AQ5TCZ1 1133 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 DCAF12L1Q5VU92 463 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 CYP4V2Q6ZWL3 525 aaPredicted RBP15.88■□□□□ 0.13
SS18-206ENST00000577572 CPNE8Q86YQ8 564 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 KCTD6Q8NC69 237 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 MRPS31Q92665 395 aaKnown RBP15.88■□□□□ 0.13
SS18-206ENST00000577572 CASP10Q92851 521 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 SLC39A13Q96H72 371 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 GCNAQ96QF7 691 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 HAPLN3Q96S86 360 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 ZNF670Q9BS34 389 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 LRRC3Q9BY71 257 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 FRMD8P1Q9BZ68 369 aaPredicted RBP15.88■□□□□ 0.13
SS18-206ENST00000577572 PRKD2Q9BZL6 878 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 OSBPL2Q9H1P3 480 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 NSUN3Q9H649 340 aaKnown RBP15.88■□□□□ 0.13
SS18-206ENST00000577572 ZWILCHQ9H900 591 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 IL21Q9HBE4 155 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 ASAH2Q9NR71 780 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 PIGVQ9NUD9 493 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 ARHGEF38Q9NXL2 777 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 PCSK1NQ9UHG2 260 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 SLC12A6Q9UHW9 1150 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 FZD10Q9ULW2 581 aa15.88■□□□□ 0.13
SS18-206ENST00000577572 GBF1Q92538 1859 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 GOLGA6L10A0A0M3HER8 536 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 CTAGE15A4D2H0 777 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 CCDC188H7C350 402 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 TJP3O95049 919 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 SLU7O95391 586 aaKnown RBP15.87■□□□□ 0.13
SS18-206ENST00000577572 OLFM2O95897 454 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 IGLV3-27P01718 113 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 SPATA31D3P0C874 917 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 CTAGE8P0CG41 777 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 TFE3P19532 575 aaPredicted RBP15.87■□□□□ 0.13
SS18-206ENST00000577572 POU3F3P20264 500 aaPredicted RBP15.87■□□□□ 0.13
SS18-206ENST00000577572 KDELR1P24390 212 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 DNA2P51530 1060 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 NRG1Q02297 640 aaPredicted RBP15.87■□□□□ 0.13
SS18-206ENST00000577572 TFDP2Q14188 446 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 C10orf120Q5SQS8 335 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 ZFYVE27Q5T4F4 411 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 NUGGCQ68CJ6 796 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 SPATA31D4Q6ZUB0 917 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 CTAGE6Q86UF2 777 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
SS18-206ENST00000577572 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 CTAGE4Q8IX94 777 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 AZIN2Q96A70 460 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 C1orf74Q96LT6 269 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 PEBP4Q96S96 227 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 PSMB7Q99436 277 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 SNRNP25Q9BV90 132 aaKnown RBP15.87■□□□□ 0.13
SS18-206ENST00000577572 ADAM33Q9BZ11 813 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 OSBPL8Q9BZF1 889 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 ZNF576Q9H609 170 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 CERS4Q9HA82 394 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.87■□□□□ 0.13
SS18-206ENST00000577572 MARCH2Q9P0N8 246 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 AP4E1Q9UPM8 1137 aa15.87■□□□□ 0.13
SS18-206ENST00000577572 LRRD1A4D1F6 860 aa15.86■□□□□ 0.13
SS18-206ENST00000577572 C3orf70A6NLC5 250 aaPredicted RBP15.86■□□□□ 0.13
SS18-206ENST00000577572 KCNU1A8MYU2 1149 aa15.86■□□□□ 0.13
SS18-206ENST00000577572 ZNF197O14709 1029 aa15.86■□□□□ 0.13
SS18-206ENST00000577572 ZNF185O15231 689 aa15.86■□□□□ 0.13
SS18-206ENST00000577572 OAS1P00973 400 aaKnown RBP15.86■□□□□ 0.13
SS18-206ENST00000577572 FGGP02679 453 aa15.86■□□□□ 0.13
SS18-206ENST00000577572 TCF4P15884 667 aa15.86■□□□□ 0.13
SS18-206ENST00000577572 EPCAMP16422 314 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms