RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 IGLV5-39A0A0G2JS06 123 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 CFAP69A5D8W1 941 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 PSMD9O00233 223 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 FOXN3O00409 490 aaPredicted RBP3.01□□□□□ -1.93
TOP2A-202ENST00000577541 TMPRSS11DO60235 418 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 SRGAP2O75044 1071 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 INMTO95050 263 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 VNN1O95497 513 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 BRAFP15056 766 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 PRKAR1BP31321 381 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 CPT1AP50416 773 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 RPS16P62249 146 aaKnown RBP3.01□□□□□ -1.93
TOP2A-202ENST00000577541 CFHR3Q02985 330 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 LMAN2Q12907 356 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 L1TD1Q5T7N2 865 aaKnown RBP3.01□□□□□ -1.93
TOP2A-202ENST00000577541 DENND2CQ68D51 928 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 MZT2AQ6P582 158 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 MYO1HQ8N1T3 1032 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 FAM156AQ8NDB6 213 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 TMEM171Q8WVE6 324 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 JDP2Q8WYK2 163 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 ATP2A3Q93084 1043 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 DPCDQ9BVM2 203 aaPredicted RBP3.01□□□□□ -1.93
TOP2A-202ENST00000577541 ZCWPW1Q9H0M4 648 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 CHST8Q9H2A9 424 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 DDX21Q9NR30 783 aaKnown RBP eCLIP3.01□□□□□ -1.93
TOP2A-202ENST00000577541 SNX15Q9NRS6 342 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 DDX20Q9UHI6 824 aaKnown RBP3.01□□□□□ -1.93
TOP2A-202ENST00000577541 RIMKLBQ9ULI2 386 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 USP22Q9UPT9 525 aa3.01□□□□□ -1.93
TOP2A-202ENST00000577541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 GOLGA6CA6NDK9 693 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 GOLGA6BA6NDN3 693 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 AP4M1O00189 453 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 PARP1P09874 1014 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 GOLGA6DP0CG33 693 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 MYBP10242 640 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 CD19P15391 556 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 BTF3P20290 206 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 PTDSS1P48651 473 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 DIO1P49895 249 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 COPAP53621 1224 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 KEAP1Q14145 624 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 GRM3Q14832 879 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 ST3GAL2Q16842 350 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 GFOD2Q3B7J2 385 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 BSPRYQ5W0U4 402 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 DARS2Q6PI48 645 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 DPY19L3Q6ZPD9 716 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 USP49Q70CQ1 688 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 UBE2Q1Q7Z7E8 422 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 LIX1LQ8IVB5 337 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 YAF2Q8IY57 180 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 MPP5Q8N3R9 675 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 ASB5Q8WWX0 329 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 MAP4K1Q92918 833 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 EDC3Q96F86 508 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 P2RY11Q96G91 374 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 MED30Q96HR3 178 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 FAM227BQ96M60 508 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 STRBPQ96SI9 672 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 NTPCRQ9BSD7 190 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 UNKQ9C0B0 810 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 ARHGAP39Q9C0H5 1083 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 PRDM11Q9NQV5 511 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 PLSCR4Q9NRQ2 329 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 RXFP3Q9NSD7 469 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 SACM1LQ9NTJ5 587 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 GOLGA6AQ9NYA3 693 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 TFCP2L1Q9NZI6 479 aa3□□□□□ -1.93
TOP2A-202ENST00000577541 NOB1Q9ULX3 412 aaKnown RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 ZSCAN21Q9Y5A6 473 aaPredicted RBP3□□□□□ -1.93
TOP2A-202ENST00000577541 SPATA31A1Q5TZJ5 1347 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 CLCA1A8K7I4 914 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 H7C4K7 107 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 AGPSO00116 658 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 MGEA5O60502 916 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 PIAS2O75928 621 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 MT-ND5P03915 603 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 CTSAP10619 480 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 PEX2P28328 305 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 MCM5P33992 734 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 HTR7P34969 479 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 ALDH5A1P51649 535 aaPredicted RBP2.99□□□□□ -1.93
TOP2A-202ENST00000577541 CFHR1Q03591 330 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 TROAPQ12815 778 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 MTX1Q13505 466 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 SLC29A2Q14542 456 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 KRTAP24-1Q3LI83 254 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 ARHGAP29Q52LW3 1261 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 C3orf38Q5JPI3 329 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 PLAG1Q6DJT9 500 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 KRT28Q7Z3Y7 464 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 KCTD20Q7Z5Y7 419 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 SPATA2LQ8IUW3 424 aaPredicted RBP2.99□□□□□ -1.93
TOP2A-202ENST00000577541 SDR16C5Q8N3Y7 309 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.99□□□□□ -1.93
TOP2A-202ENST00000577541 PNPLA1Q8N8W4 532 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 TTC8Q8TAM2 541 aa2.99□□□□□ -1.93
TOP2A-202ENST00000577541 SMCR8Q8TEV9 937 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms