RNA–Protein interactions for RNA: ENST00000576872.1

CAMTA2-216, Transcript of calmodulin binding transcription activator 2, human

TSL 2

Gene CAMTA2, Length 985 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-216	ENST00000576872	CEP83	Q9Y592	693 aa		18.3	■□□□□ 0.52
CAMTA2-216	ENST00000576872	MSI1	O43347	362 aa	Known RBP	18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NCAM1	P13591	858 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	CDH5	P33151	784 aa	Predicted RBP	18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PLA2G5	P39877	138 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	STAT1	P42224	750 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	SLC6A11	P48066	632 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	ANO4	Q32M45	955 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PTPN20	Q4JDL3	420 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	FILIP1L	Q4L180	1135 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	MAMSTR	Q6ZN01	415 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	BEND5	Q7L4P6	421 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	SPEM1	Q8N4L4	309 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	TMEM35B	Q8NCS4	154 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PIWIL1	Q96J94	861 aa	Known RBP	18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PRMT8	Q9NR22	394 aa	Predicted RBP	18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	FAM86C1	Q9NVL1	165 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	MARK1	Q9P0L2	795 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	AGO1	Q9UL18	857 aa	Known RBP	18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NAALADL1	Q9UQQ1	740 aa		18.29	■□□□□ 0.52
CAMTA2-216	ENST00000576872		A0A1B0GTH6	734 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	RNF40	O75150	1001 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	ERBB2	P04626	1255 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	MME	P08473	750 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	EIF2D	P41214	584 aa	Known RBP	18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	TAF5	Q15542	800 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NFKBIB	Q15653	356 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	TPGS1	Q6ZTW0	290 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	FAM183BP	Q6ZVS7	135 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	ZNF677	Q86XU0	584 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	DENND1C	Q8IV53	801 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	ETFBKMT	Q8IXQ9	262 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	DQX1	Q8TE96	717 aa	Known RBP	18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	SLC20A1	Q8WUM9	679 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	FAM122A	Q96E09	287 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	TRIM62	Q9BVG3	475 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NOCT	Q9UK39	431 aa	Known RBP	18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	FBXO4	Q9UKT5	387 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	KIAA1549L	Q6ZVL6	1849 aa		18.28	■□□□□ 0.52
CAMTA2-216	ENST00000576872	ATG2B	Q96BY7	2078 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	IGLV3-27	P01718	113 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	SP9	P0CG40	484 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	HARS2	P49590	506 aa	Known RBP	18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	CCR3	P51677	355 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	YWHAZ	P63104	245 aa	Known RBP	18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	TPM4	P67936	248 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	SATB1	Q01826	763 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	CSTF1	Q05048	431 aa	Known RBP	18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	MESP2	Q0VG99	397 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	FBXO43	Q4G163	708 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	SYPL2	Q5VXT5	272 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	OR6B2	Q6IFH4	312 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PKN3	Q6P5Z2	889 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PHTF2	Q8N3S3	785 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NAT16	Q8N8M0	369 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	IPO4	Q8TEX9	1081 aa	Known RBP	18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	P2RY11	Q96G91	374 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	PNKP	Q96T60	521 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	BBS2	Q9BXC9	721 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	POPDC2	Q9HBU9	364 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	ASNSD1	Q9NWL6	643 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	WDR35	Q9P2L0	1181 aa		18.27	■□□□□ 0.52
CAMTA2-216	ENST00000576872	NEDD8-MDP1	E9PL57	170 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CAPN9	O14815	690 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	TULP3	O75386	442 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	LSM8	O95777	96 aa	Known RBP	18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	SERPINC1	P01008	464 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	GLI1	P08151	1106 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	TYR	P14679	529 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CHRNB2	P17787	502 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CHKA	P35790	457 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CXCL12	P48061	93 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	TBX4	P57082	545 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	SNX16	P57768	344 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	NOMO3	P69849	1222 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	FANCC	Q00597	558 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	FMO1	Q01740	532 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CDR2	Q01850	454 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	KDSR	Q06136	332 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	NR1I3	Q14994	352 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	EFHC1	Q5JVL4	640 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	TSSK4	Q6SA08	328 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	OLFML1	Q6UWY5	402 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CACNA2D4	Q7Z3S7	1137 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	TAC4	Q86UU9	113 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	FAM217A	Q8IXS0	508 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CPXM2	Q8N436	756 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	SERPINB11	Q96P15	392 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	PHOX2B	Q99453	314 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	SYNC	Q9H7C4	482 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	ARHGEF4	Q9NR80	690 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872	C2orf42	Q9NWW7	574 aa		18.26	■□□□□ 0.51
CAMTA2-216	ENST00000576872		A0A1W2PQC6	194 aa		18.25	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CHURC1-FNTB	B4DL54	471 aa		18.25	■□□□□ 0.51
CAMTA2-216	ENST00000576872	GOLGA6L19	H0YKK7	550 aa		18.25	■□□□□ 0.51
CAMTA2-216	ENST00000576872		K7EQS6	105 aa		18.25	■□□□□ 0.51
CAMTA2-216	ENST00000576872	CACNG3	O60359	315 aa		18.25	■□□□□ 0.51
CAMTA2-216	ENST00000576872	HSF2BP	O75031	334 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms