RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GRAMD4Q6IC98 578 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 SLC47A2Q86VL8 602 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 C12orf40Q86WS4 652 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 C1orf131Q8NDD1 294 aaKnown RBP15.94■□□□□ 0.14
SMG6-220ENST00000576218 NEK11Q8NG66 645 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 STK32AQ8WU08 396 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 SEMA4AQ9H3S1 761 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 RAB23Q9ULC3 237 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 HBS1LQ9Y450 684 aaKnown RBP15.94■□□□□ 0.14
SMG6-220ENST00000576218 SYCE3A1L190 88 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 TULP3O75386 442 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 LMNAP02545 664 aaKnown RBP15.93■□□□□ 0.14
SMG6-220ENST00000576218 ZNF165P49910 485 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 POLR2FP61218 127 aaKnown RBP15.93■□□□□ 0.14
SMG6-220ENST00000576218 C10orf76Q5T2E6 689 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 TAF3Q5VWG9 929 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 SMYD5Q6GMV2 418 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 MAMSTRQ6ZN01 415 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 BHLHA9Q7RTU4 235 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 FAM71AQ8IYT1 594 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 MSANTD4Q8NCY6 345 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 PPP1R13BQ96KQ4 1090 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 STK33Q9BYT3 514 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 PLCB1Q9NQ66 1216 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 PLK2Q9NYY3 685 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
SMG6-220ENST00000576218 AGO1Q9UL18 857 aaKnown RBP15.93■□□□□ 0.14
SMG6-220ENST00000576218 PCDHGC3Q9UN70 934 aa15.93■□□□□ 0.14
SMG6-220ENST00000576218 LGALS16A8MUM7 142 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 PROB1E7EW31 1015 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 F8VZ95 297 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 CLCN1P35523 988 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 KLK7P49862 253 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 TBX4P57082 545 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 SYCP1Q15431 976 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 FILIP1LQ4L180 1135 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 OR6B2Q6IFH4 312 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 PKN3Q6P5Z2 889 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 Q6ZNB5 142 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 UNC45BQ8IWX7 931 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 TMEM35BQ8NCS4 154 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 DDI1Q8WTU0 396 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 SERPINB11Q96P15 392 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 SLC4A5Q9BY07 1137 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 NLRC4Q9NPP4 1024 aa15.92■□□□□ 0.14
SMG6-220ENST00000576218 TYW5A2RUC4 315 aaKnown RBP15.91■□□□□ 0.14
SMG6-220ENST00000576218 PRR23AA6NEV1 266 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 CHURC1-FNTBB4DL54 471 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 GREM1O60565 184 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 GFPT2O94808 682 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 KLKB1P03952 638 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 CYP11B1P15538 503 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
SMG6-220ENST00000576218 TIE1P35590 1138 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 SLC11A2P49281 568 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 FNTBP49356 437 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 DGKGP49619 791 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 DMC1Q14565 340 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 TRIP4Q15650 581 aaPredicted RBP15.91■□□□□ 0.14
SMG6-220ENST00000576218 GAB4Q2WGN9 574 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 NUGGCQ68CJ6 796 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 MSANTD2Q6P1R3 559 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 PRR23BQ6ZRT6 265 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 TOGARAM2Q6ZUX3 1019 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 CACNA2D4Q7Z3S7 1137 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 LONP2Q86WA8 852 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 CCDC33Q8N5R6 958 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 TSTD1Q8NFU3 115 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 HHIPQ96QV1 700 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 CPXM1Q96SM3 734 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 BPIFA3Q9BQP9 254 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 LHX5Q9H2C1 402 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 FAM204AQ9H8W3 233 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 POPDC2Q9HBU9 364 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 MARK1Q9P0L2 795 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 CYTH4Q9UIA0 394 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 NAALADL1Q9UQQ1 740 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 DAAM1Q9Y4D1 1078 aa15.91■□□□□ 0.14
SMG6-220ENST00000576218 PIEZO1Q92508 2521 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 FAM170AA1A519 330 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 K7EQS6 105 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 PAPSS1O43252 624 aaPredicted RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 CACNG3O60359 315 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 GABBR2O75899 941 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 PAPSS2O95340 614 aaPredicted RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 KLF8O95600 359 aaPredicted RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 APOEP02649 317 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 STAT1P42224 750 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 TNFRSF4P43489 277 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 YWHAZP63104 245 aaKnown RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 MRPS21P82921 87 aaKnown RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 EFHC1Q5JVL4 640 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 CEP68Q76N32 757 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 SYT13Q7L8C5 426 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 TRMT11Q7Z4G4 463 aaKnown RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 TMEM110Q86TL2 294 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 ETFBKMTQ8IXQ9 262 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 ZNF513Q8N8E2 541 aaPredicted RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 TERB1Q8NA31 727 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 ADAM32Q8TC27 787 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms