RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 VPS52Q8N1B4 723 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 MPP5Q8N3R9 675 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 LRRC52Q8N7C0 313 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 GSDMBQ8TAX9 411 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 OPTNQ96CV9 577 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 C7orf26Q96N11 449 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 NUDCD1Q96RS6 583 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
NCBP3-204ENST00000574911 LPIN3Q9BQK8 851 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 IQCGQ9H095 443 aaKnown RBP9.26□□□□□ -0.93
NCBP3-204ENST00000574911 BATF3Q9NR55 127 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 FBXO6Q9NRD1 293 aaPredicted RBP9.26□□□□□ -0.93
NCBP3-204ENST00000574911 SNTG2Q9NY99 539 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 SIRPGQ9P1W8 387 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 LRRC42Q9Y546 428 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 MCM3APO60318 1980 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 FAM237BA0A1B0GVD1 139 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 HMX2A2RU54 273 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 KRT38O76015 456 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 LMNAP02545 664 aaKnown RBP9.26□□□□□ -0.93
NCBP3-204ENST00000574911 MYL2P10916 166 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 ATXN1P54253 815 aaKnown RBP9.26□□□□□ -0.93
NCBP3-204ENST00000574911 SEMA5AQ13591 1074 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 BMPR2Q13873 1038 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 GRIK4Q16099 956 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 TEX44Q53QW1 395 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 CES4AQ5XG92 561 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 RFWD3Q6PCD5 774 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 TIFABQ6ZNK6 161 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 SLC26A9Q7LBE3 791 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 CFAP61Q8NHU2 1237 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 CLEC4CQ8WTT0 213 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 MIEF2Q96C03 454 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 CDCA5Q96FF9 252 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 OXNAD1Q96HP4 312 aaPredicted RBP9.26□□□□□ -0.93
NCBP3-204ENST00000574911 MAGEB5Q9BZ81 275 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 KATNBL1Q9H079 304 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 DPEP3Q9H4B8 488 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 TUBGCP4Q9UGJ1 667 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
NCBP3-204ENST00000574911 A6NJR5 290 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 H3BRB1 525 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 HOXA11P31270 313 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 CRHR1P34998 444 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ZBTB16Q05516 673 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 CDK18Q07002 472 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 HSF5Q4G112 596 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ATG16L1Q676U5 607 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 TRMT10BQ6PF06 316 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 KCNT2Q6UVM3 1135 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 RINLQ6ZS11 566 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 CYS1Q717R9 158 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 BZW1Q7L1Q6 419 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ARMC2Q8NEN0 867 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 RAB3IL1Q8TBN0 382 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 E2F7Q96AV8 911 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 CSPG4P5Q96PW8 444 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 TRIM56Q9BRZ2 755 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 MECRQ9BV79 373 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 GCOM2Q9BZD3 368 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ADAMTS10Q9H324 1103 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 TUT1Q9H6E5 874 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 XAB2Q9HCS7 855 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 KCNK4Q9NYG8 393 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 C2orf71A6NGG8 1288 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 FCHO1O14526 889 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ENTPD5O75356 428 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 DGKIO75912 1065 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ECM2O94769 699 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ADCYAP1R1P41586 468 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 SERPINB9P50453 376 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 OCRLQ01968 901 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 BST1Q10588 318 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 BST2Q10589 180 aaKnown RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 NAA25Q14CX7 972 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 NBPF20Q3BBV1 942 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 STEAP4Q687X5 459 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 NCBP2-AS2Q69YL0 99 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ALKAL1Q6UXT8 129 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 CCDC185Q8N715 623 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ANKRD52Q8NB46 1076 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 BEST2Q8NFU1 509 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 OR6B3Q8NGW1 331 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 C18orf25Q96B23 403 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 SLC13A1Q9BZW2 595 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 ARHGEF4Q9NR80 690 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 MOCS1Q9NZB8 636 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 USP3Q9Y6I4 520 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 A8MXQ7 604 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 I3L4J1 428 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 HCRTO43612 131 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 SNNO75324 88 aaPredicted RBP9.25□□□□□ -0.93
NCBP3-204ENST00000574911 CYP2C8P10632 490 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 VAV1P15498 845 aa9.25□□□□□ -0.93
NCBP3-204ENST00000574911 GRIA1P42261 906 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms