RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SLC45A4Q5BKX6 768 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 SYPL2Q5VXT5 272 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 NCBP2-AS2Q69YL0 99 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 KLHDC9Q8NEP7 349 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 CCDC110Q8TBZ0 833 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 FBF1Q8TES7 1133 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 NPY6RQ99463 290 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 ETNK2Q9NVF9 386 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 CDH9Q9ULB4 789 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 A0A0U1RQF3 1178 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 I3L4J1 428 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ZNF623O75123 536 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 B3GAT3O94766 335 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 APRTP07741 180 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 AMPD1P23109 780 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 STX2P32856 288 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ELK3P41970 407 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 CAP1Q01518 475 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 XRCC4Q13426 336 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 EFTUD2Q15029 972 aaKnown RBP eCLIP14.56□□□□□ -0.088e-9■■■■■ 34.3
VPS33B-208ENST00000574755 KLHL38Q2WGJ6 581 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 OTUD1Q5VV17 481 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 HFE2Q6ZVN8 426 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 OTUD6BQ8N6M0 293 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 NT5C3BQ969T7 300 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 SMOQ99835 787 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ADAM2Q99965 735 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ULBP1Q9BZM6 244 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 NSRP1Q9H0G5 558 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ZNF638Q14966 1978 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 TSC2P49815 1807 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 TMEM88BA6NKF7 163 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 NRP1O14786 923 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 AVILO75366 819 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 PIAS1O75925 651 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ODC1P11926 461 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 PCSK1P29120 753 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 DEUP1Q05D60 604 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 LPIN1Q14693 890 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 RNF187Q5TA31 235 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 CCSAPQ6IQ19 270 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 KCNT2Q6UVM3 1135 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 YTHDF3Q7Z739 585 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 PSTKQ8IV42 348 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 SLC2A13Q96QE2 648 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 SMC6Q96SB8 1091 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 TRABDQ9H4I3 376 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 ACSS3Q9H6R3 686 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 KIF9Q9HAQ2 790 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 TMPRSS4Q9NRS4 437 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 TRMT13Q9NUP7 481 aaKnown RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 DTLQ9NZJ0 730 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 RCOR3Q9P2K3 495 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-208ENST00000574755 INPP5FQ9Y2H2 1132 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 USP3Q9Y6I4 520 aa14.56□□□□□ -0.08
VPS33B-208ENST00000574755 FAM47DPA6NHR8 397 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 TOMM70O94826 608 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 FBXO21O94952 628 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 CST5P28325 142 aaPredicted RBP14.55□□□□□ -0.08
VPS33B-208ENST00000574755 CACNA2D1P54289 1103 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 ITGA7Q13683 1181 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 RASA2Q15283 850 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 C6orf89Q6UWU4 347 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 GPRIN1Q7Z2K8 1008 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 VPS52Q8N1B4 723 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 SLC7A14Q8TBB6 771 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 HASPINQ8TF76 798 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 SMARCD1Q96GM5 515 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 PAFAH2Q99487 392 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 ETNK1Q9HBU6 452 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 PIGVQ9NUD9 493 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 TMEM30AQ9NV96 361 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 RNF186Q9NXI6 227 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 SENP1Q9P0U3 644 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 FETUBQ9UGM5 382 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 MFHAS1Q9Y4C4 1052 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 PTCH2Q9Y6C5 1203 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 YJEFN3A6XGL0 299 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 TCP11X1B4DZS4 312 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 KBTBD13C9JR72 458 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 E7ENQ6 273 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 CREB3O43889 395 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 SPAG7O75391 227 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 USP17L7P0C7H9 530 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 TSHRP16473 764 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 DAOAP59103 153 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 PTK7Q13308 1070 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 IGDCC3Q8IVU1 814 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 ZMIZ2Q8NF64 920 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 RNF139Q8WU17 664 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 HHIPL1Q96JK4 782 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 QKIQ96PU8 341 aaKnown RBP eCLIP14.55□□□□□ -0.08
VPS33B-208ENST00000574755 FRMD8Q9BZ67 464 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms