RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PLA2G4AP47712 749 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
CTNS-208ENST00000574218 ORC1Q13415 861 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 BIRC3Q13489 604 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 PSMD6Q15008 389 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 ZNF667Q5HYK9 610 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 SCARA5Q6ZMJ2 495 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 ANKS1BQ7Z6G8 1248 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 FAM124AQ86V42 546 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 CRELD1Q96HD1 420 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 FGFBP2Q9BYJ0 223 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 LRRC27Q9C0I9 530 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 IL37Q9NZH6 218 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 THAP10Q9P2Z0 257 aaPredicted RBP12.58□□□□□ -0.4
CTNS-208ENST00000574218 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 DKK1O94907 266 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 STAU1O95793 577 aaKnown RBP12.57□□□□□ -0.4
CTNS-208ENST00000574218 TBX18O95935 607 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 EPHX1P07099 455 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 CISD3P0C7P0 127 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 CYP2J2P51589 502 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 MAP3K7CLP57077 242 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 MYL6P60660 151 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 CYP24A1Q07973 514 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 SMAD1Q15797 465 aaKnown RBP12.57□□□□□ -0.4
CTNS-208ENST00000574218 ZNF699Q32M78 642 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 C10orf120Q5SQS8 335 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 DHRS13Q6UX07 377 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 DBX2Q6ZNG2 339 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 ZNF605Q86T29 641 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 BAP1Q92560 729 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 CIPCQ9C0C6 399 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 MKRN2Q9H000 416 aaKnown RBP12.57□□□□□ -0.4
CTNS-208ENST00000574218 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 DNMT3LQ9UJW3 386 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 BTBD3Q9Y2F9 522 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 ANKRD6Q9Y2G4 727 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 SLC27A6Q9Y2P4 619 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.57□□□□□ -0.4
CTNS-208ENST00000574218 SNX11Q9Y5W9 270 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 AK5Q9Y6K8 562 aa12.57□□□□□ -0.4
CTNS-208ENST00000574218 VPS37CA5D8V6 355 aaPredicted RBP12.56□□□□□ -0.4
CTNS-208ENST00000574218 HAX1O00165 279 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 PLK4O00444 970 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
CTNS-208ENST00000574218 FAM200BP0CF97 657 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 RARGP13631 454 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 CCDC130P13994 396 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 JUPP14923 745 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 CHKAP35790 457 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 GRIA4P48058 902 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 MFAP3P55082 362 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 BNC1Q01954 994 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 ZNF234Q14588 700 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 EIF4HQ15056 248 aaKnown RBP12.56□□□□□ -0.4
CTNS-208ENST00000574218 RABEP1Q15276 862 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 KIF19Q2TAC6 998 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 SERPINA13PQ6UXR4 307 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 IGSF8Q969P0 613 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 JAKMIP2Q96AA8 810 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 TRIM9Q9C026 710 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 LHX5Q9H2C1 402 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 SRPRBQ9Y5M8 271 aaKnown RBP12.56□□□□□ -0.4
CTNS-208ENST00000574218 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
CTNS-208ENST00000574218 COL5A1P20908 1838 aaPredicted RBP12.55□□□□□ -0.4
CTNS-208ENST00000574218 CAPN8A6NHC0 703 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 MDM4O15151 490 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 CLIC2O15247 247 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 EIF3DO15371 548 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTNS-208ENST00000574218 DFNA5O60443 496 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 IGLV3-19P01714 112 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 RALAP11233 206 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 C21orf59P57076 290 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 GEN1Q17RS7 908 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 KLHDC10Q6PID8 442 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 LSM14AQ8ND56 463 aaKnown RBP12.55□□□□□ -0.4
CTNS-208ENST00000574218 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 SKA1Q96BD8 255 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 FCRL3Q96P31 734 aaPredicted RBP12.55□□□□□ -0.4
CTNS-208ENST00000574218 CDK5RAP1Q96SZ6 601 aaKnown RBP12.55□□□□□ -0.4
CTNS-208ENST00000574218 SMOQ99835 787 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 TM9SF3Q9HD45 589 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms