RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
CCNE1-204ENST00000574121 SCINQ9Y6U3 715 aa16.4■□□□□ 0.22
CCNE1-204ENST00000574121 SPTBN5Q9NRC6 3674 aaKnown RBP16.4■□□□□ 0.22
CCNE1-204ENST00000574121 SLC12A8A0AV02 714 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 ZNF263O14978 683 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 GRAP2O75791 330 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 STC2O76061 302 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 TRUB2O95900 331 aaKnown RBP16.39■□□□□ 0.21
CCNE1-204ENST00000574121 IGLV3-25P01717 112 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 IGLV3-27P01718 113 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 SRFP11831 508 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 GBP1P32455 592 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 CYLC1P35663 651 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-204ENST00000574121 PFKPQ01813 784 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 MTA1Q13330 715 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 PDGFRLQ15198 375 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 SLC25A52Q3SY17 297 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 C10orf76Q5T2E6 689 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 IRF7Q92985 503 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 ZNF653Q96CK0 615 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 PGAP3Q96FM1 320 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-204ENST00000574121 NPY6RQ99463 290 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 MRPL47Q9HD33 250 aaKnown RBP16.39■□□□□ 0.21
CCNE1-204ENST00000574121 METTL5Q9NRN9 209 aaKnown RBP16.39■□□□□ 0.21
CCNE1-204ENST00000574121 GKN1Q9NS71 199 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 DUSP12Q9UNI6 340 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 ZNF510Q9Y2H8 683 aa16.39■□□□□ 0.21
CCNE1-204ENST00000574121 FAM170AA1A519 330 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 C2CD4BA6NLJ0 364 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 IRAK2O43187 625 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 GREM1O60565 184 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 LATS1O95835 1130 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 F9P00740 461 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 SLC2A3P11169 496 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 FLT3P36888 993 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 HARS2P49590 506 aaKnown RBP16.38■□□□□ 0.21
CCNE1-204ENST00000574121 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
CCNE1-204ENST00000574121 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 EIF4EBP2Q13542 120 aaPredicted RBP16.38■□□□□ 0.21
CCNE1-204ENST00000574121 GRM2Q14416 872 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 PPP1R15BQ5SWA1 713 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 NUGGCQ68CJ6 796 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 TAC4Q86UU9 113 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 UNC45BQ8IWX7 931 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 RIN3Q8TB24 985 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 OSCP1Q8WVF1 389 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 DNASE1L2Q92874 299 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 BAG1Q99933 345 aaPredicted RBP16.38■□□□□ 0.21
CCNE1-204ENST00000574121 FAM83CQ9BQN1 747 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 BRD9Q9H8M2 597 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 CNOT8Q9UFF9 292 aaKnown RBP16.38■□□□□ 0.21
CCNE1-204ENST00000574121 INTUQ9ULD6 942 aa16.38■□□□□ 0.21
CCNE1-204ENST00000574121 TCF20Q9UGU0 1960 aaKnown RBP16.38■□□□□ 0.21
CCNE1-204ENST00000574121 LCA5LO95447 670 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 H2AFZP0C0S5 128 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 PDGFRAP16234 1089 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 DESP17661 470 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 GDI1P31150 447 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 RFC1P35251 1148 aaPredicted RBP16.37■□□□□ 0.21
CCNE1-204ENST00000574121 PTPN9P43378 593 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 TBX4P57082 545 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 GPC5P78333 572 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 DCUN1D2Q6PH85 259 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 Q6ZNB5 142 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 H2AFVQ71UI9 128 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 ST13P5Q8NFI4 369 aaPredicted RBP16.37■□□□□ 0.21
CCNE1-204ENST00000574121 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 CTNNBL1Q8WYA6 563 aaPredicted RBP16.37■□□□□ 0.21
CCNE1-204ENST00000574121 ATP2A3Q93084 1043 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 AZIN2Q96A70 460 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 SLC39A13Q96H72 371 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 MCEEQ96PE7 176 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
CCNE1-204ENST00000574121 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNE1-204ENST00000574121 DDIT4Q9NX09 232 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 DUS2Q9NX74 493 aaKnown RBP16.37■□□□□ 0.21
CCNE1-204ENST00000574121 PAXBP1Q9Y5B6 917 aa16.37■□□□□ 0.21
CCNE1-204ENST00000574121 M0QYT0 321 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 ARNTLO00327 626 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 MSI1O43347 362 aaKnown RBP16.36■□□□□ 0.21
CCNE1-204ENST00000574121 IPO7O95373 1038 aaKnown RBP16.36■□□□□ 0.21
CCNE1-204ENST00000574121 CYP1A2P05177 515 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 TMEM253P0C7T8 217 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 IRF1P10914 325 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 ABCB4P21439 1286 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 SDC4P31431 198 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 IFNAR2P48551 515 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 ZNF143P52747 638 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-204ENST00000574121 GALCP54803 685 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 PPP2R5DQ14738 602 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 SPA17Q15506 151 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 BNIPLQ7Z465 357 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 PHLDB2Q86SQ0 1253 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 EMC1Q8N766 993 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 TTC16Q8NEE8 873 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 JOSD2Q8TAC2 188 aa16.36■□□□□ 0.21
CCNE1-204ENST00000574121 RXFP2Q8WXD0 754 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms