RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PCDHA5Q9Y5H7 936 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 TIMM13Q9Y5L4 95 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 KCNE2Q9Y6J6 123 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CAPN7Q9Y6W3 813 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF335Q9H4Z2 1342 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NPHP3-ACAD11A0A0J9YXS1 232 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 UBA6A0AVT1 1052 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 C16orf96A6NNT2 1141 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 H0Y858 1186 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 PYCARD-AS1I3L0S3 204 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 EBAG9O00559 213 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RNF113AO15541 343 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 TULP3O75386 442 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RECQL5O94762 991 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 APOL3O95236 402 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ADAMTS2O95450 1211 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NTSR2O95665 410 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ALPPP05187 535 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ITGB1P05556 798 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 PFKMP08237 780 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ALPPL2P10696 532 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RARGP13631 454 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 TIMP2P16035 220 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 PFKLP17858 780 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 GJA4P35212 333 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ETV3P41162 512 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ERVFC1P60507 584 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 HAND2P61296 217 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RPL7AP62424 266 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RPL11P62913 178 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 YWHAZP63104 245 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 PRKCZQ05513 592 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 MGAT5Q09328 741 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 GRSF1Q12849 480 aaKnown RBP eCLIP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBB2AQ13885 445 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 FRG1Q14331 258 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 IRF3Q14653 427 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NOMO1Q15155 1222 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC5A9Q2M3M2 681 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC39A12Q504Y0 691 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 TTC38Q5R3I4 469 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 CATSPEREQ5SY80 951 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 EMC10Q5UCC4 262 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 LIPMQ5VYY2 423 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 GPAT2Q6NUI2 795 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NCEH1Q6PIU2 408 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ERN2Q76MJ5 926 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 LINC00346Q8IVM7 164 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NPAS3Q8IXF0 933 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 CDH26Q8IXH8 852 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 DTWD2Q8NBA8 298 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC4A11Q8NBS3 891 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 OR2I1PQ8NGU4 316 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 CPT1CQ8TCG5 803 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 XAGE3Q8WTP9 111 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RAPGEF5Q92565 580 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 RAB7BQ96AH8 199 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NLRP4Q96MN2 994 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 FCRL3Q96P31 734 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 NR1H4Q96RI1 486 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBGCP5Q96RT8 1024 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 KCNK16Q96T55 309 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 PKP4Q99569 1192 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBB2BQ9BVA1 445 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 JAM3Q9BX67 310 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 ST6GALNAC4Q9H4F1 302 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 SRRDQ9UH36 339 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 AP4E1Q9UPM8 1137 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 DYRK1BQ9Y463 629 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 CLCA3PQ9Y6N3 262 aa5.27□□□□□ -1.57
TOPBP1-210ENST00000572787 WDR19Q8NEZ3 1342 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 A0A087WZ62 844 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 H3BM21 787 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PCDH17O14917 1159 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CETN3O15182 167 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 FOXP2O15409 715 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 BUB1BO60566 1050 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 RNGTTO60942 597 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 EIF2S1P05198 315 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 FYNP06241 537 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 S100A9P06702 114 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBBP07437 444 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ABCB1P08183 1280 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 IFNGR1P15260 489 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MALP21145 153 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SERPINA4P29622 427 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 BCL6P41182 706 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MAGEA8P43361 318 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 NPY4RP50391 375 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 BMXP51813 675 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MRPL12P52815 198 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CASP9P55211 416 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SOX8P57073 446 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 STX1BP61266 288 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBB4BP68371 445 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PPARAQ07869 468 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PPP3CAQ08209 521 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms