RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 NEDD8-MDP1E9PL57 170 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 CAPN9O14815 690 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 HOXC11O43248 304 aaPredicted RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 MSI1O43347 362 aaKnown RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 GFPT2O94808 682 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 EIF2DP41214 584 aaKnown RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 HARS2P49590 506 aaKnown RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 KDSRQ06136 332 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 IQCB1Q15051 598 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 MSANTD2Q6P1R3 559 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 EZH1Q92800 747 aaPredicted RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 SPAG5Q96R06 1193 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 ERGIC2Q96RQ1 377 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 BBS2Q9BXC9 721 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 PRMT8Q9NR22 394 aaPredicted RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 AGO1Q9UL18 857 aaKnown RBP21.59■■□□□ 1.05
CHMP6-204ENST00000572778 DAAM1Q9Y4D1 1078 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 R4GN57 208 aa21.59■■□□□ 1.05
CHMP6-204ENST00000572778 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.58■■□□□ 1.05
CHMP6-204ENST00000572778 ATG13O75143 517 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 CHKAP35790 457 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 TRIP4Q15650 581 aaPredicted RBP21.58■■□□□ 1.05
CHMP6-204ENST00000572778 ZNF528Q3MIS6 628 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 ZSCAN23Q3MJ62 389 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 FILIP1LQ4L180 1135 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 PKN3Q6P5Z2 889 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 NOP9Q86U38 636 aaKnown RBP21.58■■□□□ 1.05
CHMP6-204ENST00000572778 BHMTQ93088 406 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 TRIM62Q9BVG3 475 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 SYNCQ9H7C4 482 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 CBX8Q9HC52 389 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 ARHGEF4Q9NR80 690 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 WDR35Q9P2L0 1181 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 NAALADL1Q9UQQ1 740 aa21.58■■□□□ 1.05
CHMP6-204ENST00000572778 TULP3O75386 442 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 KAT7O95251 611 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 APODP05090 189 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 FYNP06241 537 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 TYRP14679 529 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 SOX5P35711 763 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 NBL1P41271 181 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 STAT1P42224 750 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 SEC13P55735 322 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 SNX16P57768 344 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 MESP2Q0VG99 397 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 OR6B2Q6IFH4 312 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 TMEM35BQ8NCS4 154 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 RPLP0P6Q8NHW5 317 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 IPO4Q8TEX9 1081 aaKnown RBP21.57■■□□□ 1.04
CHMP6-204ENST00000572778 XPO6Q96QU8 1125 aaKnown RBP21.57■■□□□ 1.04
CHMP6-204ENST00000572778 C2orf42Q9NWW7 574 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 PLK2Q9NYY3 685 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 MARK1Q9P0L2 795 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 DEC1Q9P2X7 70 aa21.57■■□□□ 1.04
CHMP6-204ENST00000572778 FAM170AA1A519 330 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 K7EQS6 105 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 TEX33O43247 280 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 GRIA2P42262 883 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 TBX4P57082 545 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 JAM2P57087 298 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 YWHAZP63104 245 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 TPM4P67936 248 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 PREPLQ4J6C6 727 aaPredicted RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 SYPL2Q5VXT5 272 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 ZC3H14Q6PJT7 736 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 ETFBKMTQ8IXQ9 262 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 CCDC26Q8TAB7 109 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 DQX1Q8TE96 717 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 DDX1Q92499 740 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 PIWIL1Q96J94 861 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 POPDC2Q9HBU9 364 aa21.56■■□□□ 1.04
CHMP6-204ENST00000572778 RTN4Q9NQC3 1192 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 DNAJC17Q9NVM6 304 aaKnown RBP21.56■■□□□ 1.04
CHMP6-204ENST00000572778 TBC1D3BA6NDS4 549 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 CHURC1-FNTBB4DL54 471 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 ERBB2P04626 1255 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 MMEP08473 750 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 TAF5Q15542 800 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 PTPN20Q4JDL3 420 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 C2orf27AQ580R0 203 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 EFHC1Q5JVL4 640 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 GRAMD4Q6IC98 578 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 FAM183BPQ6ZVS7 135 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 BEND5Q7L4P6 421 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 CACNA2D4Q7Z3S7 1137 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 LUZP1Q86V48 1076 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 SFTPA1Q8IWL2 248 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 ADAM32Q8TC27 787 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 EPS8L1Q8TE68 723 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 ATRIPQ8WXE1 791 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 SERPINB11Q96P15 392 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 SLC8A2Q9UPR5 921 aa21.55■■□□□ 1.04
CHMP6-204ENST00000572778 TRIM24O15164 1050 aa21.54■■□□□ 1.04
CHMP6-204ENST00000572778 CACNG3O60359 315 aa21.54■■□□□ 1.04
CHMP6-204ENST00000572778 SERPINC1P01008 464 aa21.54■■□□□ 1.04
CHMP6-204ENST00000572778 CYBBP04839 570 aa21.54■■□□□ 1.04
CHMP6-204ENST00000572778 CDH5P33151 784 aaPredicted RBP21.54■■□□□ 1.04
CHMP6-204ENST00000572778 NRLP54845 237 aa21.54■■□□□ 1.04
CHMP6-204ENST00000572778 NUDT18Q6ZVK8 323 aa21.54■■□□□ 1.04
CHMP6-204ENST00000572778 ALYREFQ86V81 257 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms