RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 NOMO1Q15155 1222 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 DPYSL2Q16555 572 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 CCDC142Q17RM4 750 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 SLC25A52Q3SY17 297 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.47
RPAIN-208ENST00000571043 ZCCHC9Q8N567 271 aaKnown RBP18.02■□□□□ 0.47
RPAIN-208ENST00000571043 COLGALT1Q8NBJ5 622 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.02■□□□□ 0.47
RPAIN-208ENST00000571043 PCED1BQ96HM7 432 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 IGSF21Q96ID5 467 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 SUSD3Q96L08 255 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 ZNF558Q96NG5 402 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 TMEM121Q9BTD3 319 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 ADAM7Q9H2U9 754 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 VWA8A3KMH1 1905 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 TRAPPC3O43617 180 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 AP1G2O75843 785 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 MYOGP15173 224 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 TYMPP19971 482 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 STIP1P31948 543 aaKnown RBP18.01■□□□□ 0.47
RPAIN-208ENST00000571043 NOS2P35228 1153 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 BRCC3P46736 316 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 MAP3K7CLP57077 242 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 GPS1Q13098 491 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 MMRN1Q13201 1228 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 MORF4L2Q15014 288 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 KRT71Q3SY84 523 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 RAB41Q5JT25 222 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 KCTD16Q68DU8 428 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 SLC9A4Q6AI14 798 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 FAM171BQ6P995 826 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 KDM7AQ6ZMT4 941 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 PCGF5Q86SE9 256 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 CCDC25Q86WR0 208 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 TMEM173Q86WV6 379 aaPredicted RBP18.01■□□□□ 0.47
RPAIN-208ENST00000571043 DEFB106AQ8N104 65 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 SLC39A11Q8N1S5 342 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 GLIS1Q8NBF1 620 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 HASPINQ8TF76 798 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 RSAD2Q8WXG1 361 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 NT5C3BQ969T7 300 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 SMARCD1Q96GM5 515 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 SLC2A13Q96QE2 648 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 SMOQ99835 787 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 RTP3Q9BQQ7 232 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 CDC42EP4Q9H3Q1 356 aaKnown RBP18.01■□□□□ 0.47
RPAIN-208ENST00000571043 CNGB3Q9NQW8 809 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 SAE1Q9UBE0 346 aaPredicted RBP18.01■□□□□ 0.47
RPAIN-208ENST00000571043 PCDHB12Q9Y5F1 795 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 CHD9Q3L8U1 2897 aa18.01■□□□□ 0.47
RPAIN-208ENST00000571043 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 LINC01553A4QN01 128 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 APOL1O14791 398 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 SHBGP04278 402 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 ZSCAN5DPP0CG00 497 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 PECAM1P16284 738 aaPredicted RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 TFE3P19532 575 aaPredicted RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 RDXP35241 583 aaKnown RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 ANKRD20A8PQ5CZ79 823 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 ZC3H12AQ5D1E8 599 aaKnown RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 INTS6LQ5JSJ4 861 aaKnown RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 ZNF771Q7L3S4 317 aaPredicted RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 BNIPLQ7Z465 357 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 PRUNE1Q86TP1 453 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 SH2D3CQ8N5H7 860 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 ARFGAP2Q8N6H7 521 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 BCL7CQ8WUZ0 217 aaPredicted RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 P3H4Q92791 437 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 GPR62Q9BZJ7 368 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 ROPN1BQ9BZX4 212 aaPredicted RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 ROPN1Q9HAT0 212 aaPredicted RBP18■□□□□ 0.47
RPAIN-208ENST00000571043 PRDM16Q9HAZ2 1276 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 CSNK1G1Q9HCP0 422 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 GPATCH2LQ9NWQ4 482 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 STAP1Q9ULZ2 295 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 SHOC2Q9UQ13 582 aa18■□□□□ 0.47
RPAIN-208ENST00000571043 SMAPO00193 183 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
RPAIN-208ENST00000571043 TTC4O95801 387 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 IFNB1P01574 187 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 RBP3P10745 1247 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 ETS1P14921 441 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 ZFXP17010 805 aaPredicted RBP17.99■□□□□ 0.47
RPAIN-208ENST00000571043 NR1D1P20393 614 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 L1CAMP32004 1257 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 BMPR1AP36894 532 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 SULT1E1P49888 294 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 TKTL1P51854 596 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 MAPRE1Q15691 268 aaKnown RBP17.99■□□□□ 0.47
RPAIN-208ENST00000571043 CA9Q16790 459 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 C6orf118Q5T5N4 469 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 RNASEH2BQ5TBB1 312 aaKnown RBP17.99■□□□□ 0.47
RPAIN-208ENST00000571043 CHRDL2Q6WN34 429 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 THEM5Q8N1Q8 247 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 PQLC3Q8N755 202 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 PLD5Q8N7P1 536 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 ZMIZ2Q8NF64 920 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 FAM149B1Q96BN6 582 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 PGM2Q96G03 612 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 NPY6RQ99463 290 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms