RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ADAM9Q13443 819 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 GEN1Q17RS7 908 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 DUOXA1Q1HG43 343 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC36A4Q6YBV0 504 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 Q6ZNB5 142 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 INTS8Q75QN2 995 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 DENND1CQ8IV53 801 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 HDDC3Q8N4P3 179 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 MINDY1Q8N5J2 469 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 CCDC150Q8NCX0 1101 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 CCDC47Q96A33 483 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 MRGPRX1Q96LB2 322 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 ARID3AQ99856 593 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 DUSP16Q9BY84 665 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 ADAM33Q9BZ11 813 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC32A1Q9H598 525 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 CD248Q9HCU0 757 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 MARK1Q9P0L2 795 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 ZMIZ1Q9ULJ6 1067 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 CLEC4EQ9ULY5 219 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 WASF3Q9UPY6 502 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 ZDHHC9Q9Y397 364 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 PCDHA5Q9Y5H7 936 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 STON1Q9Y6Q2 735 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 CABIN1Q9Y6J0 2220 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 NUMA1Q14980 2115 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 PLXND1Q9Y4D7 1925 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 ZNF217O75362 1048 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 RHOBTB3O94955 611 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 SERPINF2P08697 491 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 CORO1AP31146 461 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 PSMC2P35998 433 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 KRT85P78386 507 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 SEMA3BQ13214 749 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 FUT11Q495W5 492 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 SPDYCQ5MJ68 293 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 FYB2Q5VWT5 728 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 KLHDC10Q6PID8 442 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 KRBA2Q6ZNG9 492 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 RSRC2Q7L4I2 434 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 CCDC186Q7Z3E2 898 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 PIGZQ86VD9 579 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 TMEM174Q8WUU8 243 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 SORCS1Q8WY21 1168 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 TATDN2Q93075 761 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 CAMK1GQ96NX5 476 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 GABRG3Q99928 467 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 DUSP9Q99956 384 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 GOLPH3LQ9H4A5 285 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 GDPD2Q9HCC8 539 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 TMEM8AQ9HCN3 771 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 CISHQ9NSE2 258 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 KLK13Q9UKR3 277 aa9.04□□□□□ -0.96
CTDNEP1-203ENST00000570385 GOLGA4Q13439 2230 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC12A8A0AV02 714 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 TULP2O00295 520 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MAPK13O15264 365 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 TSPAN3O60637 253 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 OPHN1O60890 802 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MYL1P05976 194 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 RPL13P26373 211 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 IL12RB1P42701 662 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PSEN1P49768 467 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MXI1P50539 228 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 RAD23BP54727 409 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MFAP3P55082 362 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 YWHAGP61981 247 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 LRMPQ12912 555 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PEAR1Q5VY43 1037 aaPredicted RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 KRT39Q6A163 491 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 GUF1Q8N442 669 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 CHCHD4Q8N4Q1 142 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC4A11Q8NBS3 891 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 CEP76Q8TAP6 659 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 TOE1Q96GM8 510 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 TMEM176AQ96HP8 235 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 GPR174Q9BXC1 333 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 TMEM121BQ9BXQ6 578 aaPredicted RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 ULBP1Q9BZM6 244 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 CIPCQ9C0C6 399 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MKRN2Q9H000 416 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MIR1-1HGQ9H1L0 117 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PRDM16Q9HAZ2 1276 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PNPLA8Q9NP80 782 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 MARCH2Q9P0N8 246 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 AGO1Q9UL18 857 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
CTDNEP1-203ENST00000570385 ATRXP46100 2492 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 MEI4A8MW99 385 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 KCNJ18B7U540 433 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 SH3BP5O60239 455 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF202O95125 648 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 PENKP01210 267 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms