RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 SNRNP25Q9BV90 132 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 CAPS2Q9BXY5 557 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ULBP1Q9BZM6 244 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.26□□□□□ -1.41
CYLD-216ENST00000569891 UXTQ9UBK9 157 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 TRHDEQ9UKU6 1024 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 NEU2Q9Y3R4 380 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TYW5A2RUC4 315 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 OAZ2O95190 189 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 BASP1P80723 227 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 SOX4Q06945 474 aaPredicted RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 PLEKHG4Q58EX7 1191 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 GPR65Q8IYL9 337 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 IQCKQ8N0W5 287 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 NUP93Q8N1F7 819 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SLC35B2Q8TB61 432 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 FBXO25Q8TCJ0 367 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PGM2Q96G03 612 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TMEM169Q96HH4 297 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PCED1BQ96HM7 432 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SLC2A13Q96QE2 648 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PLCD4Q9BRC7 762 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 NACA2Q9H009 215 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 VPS37BQ9H9H4 285 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 GOLGA2P5Q9HBQ8 144 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 DDIT4Q9NX09 232 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 ADGRG4Q8IZF6 3080 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PPEF2O14830 753 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PQBP1O60828 265 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 CALCAP01258 141 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 CFHP08603 1231 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 FLT3P36888 993 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 LAMB3Q13751 1172 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SMTNL2Q2TAL5 461 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 USP41Q3LFD5 358 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SLC45A4Q5BKX6 768 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 FAM171BQ6P995 826 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 B4GALNT4Q76KP1 1039 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SREK1Q8WXA9 508 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 ALKBH8Q96BT7 664 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 RBM15Q96T37 977 aaKnown RBP eCLIP6.25□□□□□ -1.41
CYLD-216ENST00000569891 SH3GL2Q99962 352 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 B3GNT5Q9BYG0 378 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 NRDE2Q9H7Z3 1164 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PCDH18Q9HCL0 1135 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 CSNK1G1Q9HCP0 422 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 CHST7Q9NS84 486 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TBC1D13Q9NVG8 400 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 HSFX1Q9UBD0 423 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 FETUBQ9UGM5 382 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SLC24A2Q9UI40 661 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 GRAP2O75791 330 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TTC4O95801 387 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 ACAT1P24752 427 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 KCNJ1P48048 391 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 VPS41P49754 854 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 LHX8Q68G74 356 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 FBXO46Q6PJ61 603 aaPredicted RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 ANKRD33Q7Z3H0 272 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 UNC45BQ8IWX7 931 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 FAM126BQ8IXS8 530 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 RAPGEF5Q92565 580 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 GDAP1L1Q96MZ0 367 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 DPEP3Q9H4B8 488 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TMBIM4Q9HC24 238 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TXNDC16Q9P2K2 825 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 HEY1Q9Y5J3 304 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 ANK1P16157 1881 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 CELSR1Q9NYQ6 3014 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 IQANK1A0A1B0GTG1 560 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TBKBP1A7MCY6 615 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 BHMG1C9JSJ3 638 aaPredicted RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 ENDOD1O94919 500 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 KRT10P13645 584 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 LMO2P25791 158 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 CDK7P50613 346 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 DSC1Q08554 894 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SCAPQ12770 1279 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 NME3Q13232 169 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 DPYSL3Q14195 570 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TPGS2Q68CL5 300 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 GSPT2Q8IYD1 628 aaKnown RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 OVCA2Q8WZ82 227 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 ZNF558Q96NG5 402 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 NPY6RQ99463 290 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 TRIM7Q9C029 511 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 SAYSD1Q9NPB0 183 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 ADAM21Q9UKJ8 722 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 DNPEPQ9ULA0 475 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 PRG3Q9Y2Y8 225 aaPredicted RBP6.25□□□□□ -1.41
CYLD-216ENST00000569891 DOCK3Q8IZD9 2030 aa6.25□□□□□ -1.41
CYLD-216ENST00000569891 GBF1Q92538 1859 aa6.24□□□□□ -1.41
CYLD-216ENST00000569891 SPTLC1O15269 473 aa6.24□□□□□ -1.41
CYLD-216ENST00000569891 KCNN4O15554 427 aa6.24□□□□□ -1.41
CYLD-216ENST00000569891 BAIAP3O94812 1187 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms