RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MYADML2A6NDP7 307 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 HACD1B0YJ81 288 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 TRDMT1O14717 391 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 APOL1O14791 398 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PRPF4O43172 522 aaKnown RBP eCLIP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SPAG6O75602 509 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 TRPA1O75762 1119 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 GRAP2O75791 330 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CABYRO75952 493 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 IFNB1P01574 187 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CYP11A1P05108 521 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 GSTA2P09210 222 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RARBP10826 455 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CCDC130P13994 396 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 NPR3P17342 541 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 GCAP28676 217 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PHBP35232 272 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SLCO1A2P46721 670 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 HCAR3P49019 387 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CTCFP49711 727 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 FLT3LGP49771 235 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RAB27AP51159 221 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF135P52742 658 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 GDF10P55107 478 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 GPX6P59796 221 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 YWHAZP63104 245 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 FAM189BP81408 668 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 MRPS5P82675 430 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 HTRA3P83110 453 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 ATP11AP98196 1134 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CAP1Q01518 475 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 ROR1Q01973 937 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PRKCZQ05513 592 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PDIA2Q13087 525 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 MMRN1Q13201 1228 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 MPP2Q14168 576 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 KRT81Q14533 505 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 KCNJ11Q14654 390 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 HIF1AQ16665 826 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CA9Q16790 459 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 UPP1Q16831 310 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RAB6CQ53S08 254 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 OXLD1Q5BKU9 147 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RAB41Q5JT25 222 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 FNBP1LQ5T0N5 605 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF618Q5T7W0 954 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 WSCD1Q658N2 575 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 FAM171BQ6P995 826 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 ADGRD1Q6QNK2 874 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 POTEHQ6S545 545 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 VSTM1Q6UX27 236 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CXCL17Q6UXB2 119 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CD300LGQ6UXG3 332 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 AGMOQ6ZNB7 445 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 BZW1Q7L1Q6 419 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 BEND5Q7L4P6 421 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PRUNE1Q86TP1 453 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PIGZQ86VD9 579 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 TAX1BP1Q86VP1 789 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 DEFB106AQ8N104 65 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CNPY4Q8N129 248 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PDIK1LQ8N165 341 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PCSK9Q8NBP7 692 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 UHMK1Q8TAS1 419 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 DENND1AQ8TEH3 1009 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PYROXD1Q8WU10 500 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SREK1Q8WXA9 508 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 IRGQQ8WZA9 623 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 TRIB2Q92519 343 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 HAUS1Q96CS2 278 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 LRRC39Q96DD0 335 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PGAP3Q96FM1 320 aaPredicted RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PIWIL1Q96J94 861 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SENP8Q96LD8 212 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 ASB16Q96NS5 453 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SLC2A13Q96QE2 648 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 GAD1Q99259 594 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 LPIN3Q9BQK8 851 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SNRNP25Q9BV90 132 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PRR14Q9BWN1 585 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 APOL6Q9BWW8 343 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 B3GNT5Q9BYG0 378 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RAB6CQ9H0N0 254 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CSNK1G1Q9HCP0 422 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PNPLA8Q9NP80 782 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PPANQ9NQ55 473 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CNGB3Q9NQW8 809 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 FAM49BQ9NUQ9 324 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 MIOSQ9NXC5 875 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 SAGE1Q9NXZ1 904 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RRN3Q9NYV6 651 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 DDX20Q9UHI6 824 aaKnown RBP5.59□□□□□ -1.51
SF3B3-213ENST00000569687 CDH9Q9ULB4 789 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 RAD54BQ9Y620 910 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PTCH2Q9Y6C5 1203 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 FAM169AQ9Y6X4 670 aa5.59□□□□□ -1.51
SF3B3-213ENST00000569687 PCNTO95613 3336 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms