RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 DPH1Q9BZG8 443 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 MTMR12Q9C0I1 747 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 CCSER2Q9H7U1 834 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 INTS13Q9NVM9 706 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 IL37Q9NZH6 218 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 SIX4Q9UIU6 781 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 TPX2Q9ULW0 747 aaKnown RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 CLCA2Q9UQC9 943 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 KIF3AQ9Y496 699 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 HEMK1Q9Y5R4 338 aaPredicted RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 ZNF638Q14966 1978 aaKnown RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 HECTD1Q9ULT8 2610 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 FAM92AA1XBS5 289 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 ZNF233A6NK53 670 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 TISP43B9A030 160 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 HCRTO43612 131 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 TSPAN3O60637 253 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 SEMA4FO95754 770 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 EPHX1P07099 455 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 GAP43P17677 238 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 TRIM21P19474 475 aaKnown RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 GLDCP23378 1020 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 DDIT3P35638 169 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 ACADVLP49748 655 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 NEK4P51957 841 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 SLC5A3P53794 718 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 TNNC1P63316 161 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 GRIN1Q05586 938 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 TTC31Q49AM3 519 aaPredicted RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 SLC45A4Q5BKX6 768 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 L1TD1Q5T7N2 865 aaKnown RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 KLHDC10Q6PID8 442 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 XKR5Q6UX68 686 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 SERPINA13PQ6UXR4 307 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 USP49Q70CQ1 688 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 ANKS1BQ7Z6G8 1248 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 FAM124AQ86V42 546 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 FMNL3Q8IVF7 1028 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 DHX40Q8IX18 779 aaKnown RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 OXR1Q8N573 874 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 B3GALNT2Q8NCR0 500 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 SNRNP27Q8WVK2 155 aaKnown RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 RFFLQ8WZ73 363 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 GOLGA1Q92805 767 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 SMARCD1Q96GM5 515 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 TNIP3Q96KP6 325 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 DCLK3Q9C098 648 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 LHX5Q9H2C1 402 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 MRPL44Q9H9J2 332 aaKnown RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 KIAA1586Q9HCI6 787 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 PDE11AQ9HCR9 933 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 DMAP1Q9NPF5 467 aaPredicted RBP9.15□□□□□ -0.94
SMG1-216ENST00000569122 ELOVL2Q9NXB9 296 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 SCML1Q9UN30 329 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 PLA2G4CQ9UP65 541 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 LIMCH1Q9UPQ0 1083 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 NCKAP1Q9Y2A7 1128 aa9.15□□□□□ -0.94
SMG1-216ENST00000569122 PTPRDP23468 1912 aa9.15□□□□□ -0.95
SMG1-216ENST00000569122 KIAA1549LQ6ZVL6 1849 aa9.15□□□□□ -0.95
SMG1-216ENST00000569122 A8MXQ7 604 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 KCNK3O14649 394 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 FSBPO95073 299 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 DNTTP04053 509 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 C7P10643 843 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 CKMT2P17540 419 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 COPAP53621 1224 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 MFAP3P55082 362 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 ERVPABLB-1P60509 514 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMG1-216ENST00000569122 PDE4CQ08493 712 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 ZNF234Q14588 700 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 ARHGAP40Q5TG30 622 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 ERICH1Q86X53 443 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 GPD1LQ8N335 351 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 SCAMP5Q8TAC9 235 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 SAP25Q8TEE9 199 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 TSC1Q92574 1164 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 LARP4BQ92615 738 aaKnown RBP9.14□□□□□ -0.95
SMG1-216ENST00000569122 RAD54LQ92698 747 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 BIRC7Q96CA5 298 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 SAAL1Q96ER3 474 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 CCDC97Q96F63 343 aaPredicted RBP9.14□□□□□ -0.95
SMG1-216ENST00000569122 CDK5RAP1Q96SZ6 601 aaKnown RBP9.14□□□□□ -0.95
SMG1-216ENST00000569122 MED10Q9BTT4 135 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 B3GNT5Q9BYG0 378 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 SLC2A11Q9BYW1 496 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 TRIM9Q9C026 710 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 ZNF518BQ9C0D4 1074 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 C6orf106Q9H6K1 298 aaPredicted RBP9.14□□□□□ -0.95
SMG1-216ENST00000569122 GDF3Q9NR23 364 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
SMG1-216ENST00000569122 IL17BQ9UHF5 180 aa9.14□□□□□ -0.95
SMG1-216ENST00000569122 PTPRQQ9UMZ3 2332 aa9.13□□□□□ -0.95
SMG1-216ENST00000569122 GREM1O60565 184 aa9.13□□□□□ -0.95
SMG1-216ENST00000569122 PPP1R37O75864 691 aa9.13□□□□□ -0.95
SMG1-216ENST00000569122 GCNT3O95395 438 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms