RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	DDN	O94850	711 aa	Predicted RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	RPSA	P08865	295 aa	Known RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	DLD	P09622	509 aa	Known RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	ZNF286B	P0CG31	522 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	L1CAM	P32004	1257 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	NRL	P54845	237 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	SEMA5A	Q13591	1074 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	TBCC	Q15814	346 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	CTC1	Q2NKJ3	1217 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	EFHC1	Q5JVL4	640 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	UNC5A	Q6ZN44	842 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	CATSPER4	Q7RTX7	472 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	CCDC110	Q8TBZ0	833 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	PTPRN2	Q92932	1015 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	HSFY1	Q96LI6	401 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	NUDCD1	Q96RS6	583 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	SIKE1	Q9BRV8	207 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	WWP1	Q9H0M0	922 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	DCLRE1B	Q9H816	532 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	MORF4L1	Q9UBU8	362 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	PCDHA11	Q9Y5I1	949 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	GYG2	O15488	501 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	C1QA	P02745	245 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	ADORA2A	P29274	412 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	EPHB2	P29323	1055 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	AXL	P30530	894 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	CRHR1	P34998	444 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	RPL34	P49207	117 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	TMPRSS15	P98073	1019 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	ZRSR2	Q15696	482 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	DGKD	Q16760	1214 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	CA9	Q16790	459 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	PLEKHG4	Q58EX7	1191 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	ANKRD20A2	Q5SQ80	823 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	STXBP5	Q5T5C0	1151 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	ANKRD20A1	Q5TYW2	823 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	TIFAB	Q6ZNK6	161 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	PRPF39	Q86UA1	669 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	ACMSD	Q8TDX5	336 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	DEPDC1B	Q8WUY9	529 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	TFB1M	Q8WVM0	346 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	2e-9	■■□□□ 12.4
PKM-222	ENST00000568883	ATP2A3	Q93084	1043 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	MCUR1	Q96AQ8	359 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	E2F7	Q96AV8	911 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	PTCD3	Q96EY7	689 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	NAT9	Q9BTE0	207 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	TRIM6	Q9C030	488 aa	Predicted RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	SNX25	Q9H3E2	840 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	ALG13	Q9NP73	1137 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	EIF2B3	Q9NR50	452 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	SLC5A4	Q9NY91	659 aa		13.11	□□□□□ -0.31
PKM-222	ENST00000568883	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	GOLGB1	Q14789	3259 aa	Known RBP	13.11	□□□□□ -0.31
PKM-222	ENST00000568883	PEX11A	O75192	247 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	ESRRA	P11474	423 aa	Predicted RBP	13.1	□□□□□ -0.31
PKM-222	ENST00000568883	HOXD8	P13378	290 aa	Predicted RBP	13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SERPINB3	P29508	390 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	ZBTB6	Q15916	424 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	RAB6C	Q53S08	254 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	FBXO47	Q5MNV8	452 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SYCP2L	Q5T4T6	812 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	FAXC	Q5TGI0	409 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	DLK2	Q6UY11	383 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	KYAT3	Q6YP21	454 aa	Known RBP	13.1	□□□□□ -0.31
PKM-222	ENST00000568883	CRLF3	Q8IUI8	442 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	NUDCD3	Q8IVD9	361 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	CRYBG2	Q8N1P7	616 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	TMEM130	Q8N3G9	435 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	ZC3H15	Q8WU90	426 aa	Known RBP	13.1	□□□□□ -0.31
PKM-222	ENST00000568883	TNIP3	Q96KP6	325 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SIGLEC10	Q96LC7	697 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	CSPG4P5	Q96PW8	444 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	RAB6C	Q9H0N0	254 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SNTG2	Q9NY99	539 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SIRPG	Q9P1W8	387 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	KANSL3	Q9P2N6	904 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	2e-6	■■■■■ 58.1
PKM-222	ENST00000568883		A0A0A0MRY4	1105 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	LIN7A	O14910	233 aa	Predicted RBP	13.1	□□□□□ -0.31
PKM-222	ENST00000568883	RFPL1	O75677	317 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	MYL2	P10916	166 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	GCLC	P48506	637 aa	Predicted RBP	13.1	□□□□□ -0.31
PKM-222	ENST00000568883	NAA25	Q14CX7	972 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	TSNAXIP1	Q2TAA8	658 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	CMPK2	Q5EBM0	449 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	C9orf57	Q5W0N0	161 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	KCNT2	Q6UVM3	1135 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	MAMDC4	Q6UXC1	1216 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	TEX9	Q8N6V9	391 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	C7orf31	Q8N865	590 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	NLGN2	Q8NFZ4	835 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	HTR3C	Q8WXA8	447 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	SPATA13	Q96N96	652 aa		13.1	□□□□□ -0.31
PKM-222	ENST00000568883	C12orf65	Q9H3J6	166 aa	Known RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms