RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	TMPRSS7	Q7RTY8	843 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	NELFCD	Q8IXH7	590 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	ZCCHC9	Q8N567	271 aa	Known RBP	12	□□□□□ -0.49
TCF4-238	ENST00000568169	SLC2A14	Q8TDB8	520 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	SETD7	Q8WTS6	366 aa	Known RBP	12	□□□□□ -0.49
TCF4-238	ENST00000568169	CUEDC2	Q9H467	287 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	GAREM1	Q9H706	876 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	NMUR1	Q9HB89	426 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	IL21R	Q9HBE5	538 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	SCUBE2	Q9NQ36	999 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	TM7SF3	Q9NS93	570 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	TOR4A	Q9NXH8	423 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	PLK2	Q9NYY3	685 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	CGN	Q9P2M7	1197 aa	Known RBP	12	□□□□□ -0.49
TCF4-238	ENST00000568169	THAP10	Q9P2Z0	257 aa	Predicted RBP	12	□□□□□ -0.49
TCF4-238	ENST00000568169	ITPR1	Q14643	2758 aa		12	□□□□□ -0.49
TCF4-238	ENST00000568169	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	PTPRQ	Q9UMZ3	2332 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	HHLA1	C9JL84	531 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	BCAT2	O15382	392 aa	Predicted RBP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	CILP	O75339	1184 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	STC2	O76061	302 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	VNN1	O95497	513 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	CER1	O95813	267 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	PENK	P01210	267 aa	Predicted RBP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	IGLV3-19	P01714	112 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	SYT1	P21579	422 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	OXTR	P30559	389 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	MATK	P42679	507 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	IL12RB1	P42701	662 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	NASP	P49321	788 aa	Predicted RBP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	TPMT	P51580	245 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	NDST1	P52848	882 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	AP3M2	P53677	418 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	MFAP3	P55082	362 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	NCOA4	Q13772	614 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	IL27RA	Q6UWB1	636 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	SCARA5	Q6ZMJ2	495 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	GPRIN1	Q7Z2K8	1008 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	UNC93A	Q86WB7	457 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	TMPRSS6	Q8IU80	811 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	ZNF276	Q8N554	614 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	SPRYD3	Q8NCJ5	442 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	C1orf216	Q8TAB5	229 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	PARD3B	Q8TEW8	1205 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	BHMT	Q93088	406 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	ELMO3	Q96BJ8	720 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	C7orf25	Q9BPX7	421 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	MIR1-1HG	Q9H1L0	117 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	HMGXB4	Q9UGU5	601 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	DNMT3L	Q9UJW3	386 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	RAX	Q9Y2V3	346 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	PCDHGB2	Q9Y5G2	931 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169	NBEA	Q8NFP9	2946 aa		11.99	□□□□□ -0.49
TCF4-238	ENST00000568169		A0A1W2PQH9	124 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	MDM4	O15151	490 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	CYP26A1	O43174	497 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	EXOC3	O60645	756 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	KLKB1	P03952	638 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	ATXN1L	P0C7T5	689 aa	Known RBP	11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	RARG	P13631	454 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	ORC1	Q13415	861 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	GEN1	Q17RS7	908 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	HLA-B	Q31612	363 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	DCAF12L1	Q5VU92	463 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	CLEC20A	Q6ZU45	233 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	UNC13D	Q70J99	1090 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	C12orf29	Q8N999	325 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	UCMA	Q8WVF2	138 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	DHX58	Q96C10	678 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	SIPA1	Q96FS4	1042 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	BBC3	Q96PG8	261 aa	Predicted RBP	11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	HNRNPAB	Q99729	332 aa	Known RBP	11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	CDC6	Q99741	560 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	NUP58	Q9BVL2	599 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	PCED1A	Q9H1Q7	454 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	FAM49B	Q9NUQ9	324 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	EIF2B4	Q9UI10	523 aa	Known RBP	11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	NUDT5	Q9UKK9	219 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	PCDHA5	Q9Y5H7	936 aa		11.98	□□□□□ -0.49
TCF4-238	ENST00000568169	HELZ2	Q9BYK8	2649 aa	Known RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	FLRT2	O43155	660 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	RPN1	P04843	607 aa	Known RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	FAM200B	P0CF97	657 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	P4HA1	P13674	534 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	ADORA2B	P29275	332 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	PSEN1	P49768	467 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	COPA	P53621	1224 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	KNOP1	Q1ED39	458 aa	Known RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	SGSM1	Q2NKQ1	1148 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	C10orf120	Q5SQS8	335 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	FYB2	Q5VWT5	728 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	SCD5	Q86SK9	330 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	IQUB	Q8NA54	791 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	LINC00301	Q8NCQ3	95 aa		11.97	□□□□□ -0.49

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