RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 OTUD1Q5VV17 481 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-220ENST00000567720 HGSNATQ68CP4 663 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 NAIF1Q69YI7 327 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-220ENST00000567720 HTR3DQ70Z44 454 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 MON1BQ7L1V2 547 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 ZNF571Q7Z3V5 609 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-220ENST00000567720 ZDHHC17Q8IUH5 632 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 FBXL6Q8N531 539 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 MSANTD4Q8NCY6 345 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 ZNF397Q8NF99 534 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-220ENST00000567720 FLCNQ8NFG4 579 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 ADAM32Q8TC27 787 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 PLD4Q96BZ4 506 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 C18orf8Q96DM3 657 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 LRFN3Q9BTN0 628 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 TRIM62Q9BVG3 475 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 LSM7Q9UK45 103 aaKnown RBP17.97■□□□□ 0.47
COMMD4-220ENST00000567720 HBS1LQ9Y450 684 aaKnown RBP17.97■□□□□ 0.47
COMMD4-220ENST00000567720 ATG2BQ96BY7 2078 aa17.97■□□□□ 0.47
COMMD4-220ENST00000567720 SLC9A3R1O14745 358 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 IGLV3-25P01717 112 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 SKILP12757 684 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 TARSP26639 723 aaKnown RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 GJA4P35212 333 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 SCNN1AP37088 669 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 NSFP46459 744 aaKnown RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 VCPP55072 806 aaKnown RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 SNX16P57768 344 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 KLHL30Q0D2K2 578 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 TRIM14Q14142 442 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 TRIP4Q15650 581 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 EFHC1Q5JVL4 640 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 DEFB106AQ8N104 65 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 PJA1Q8NG27 643 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 SYN2Q92777 582 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 OTUB2Q96DC9 234 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 MSANTD3Q96H12 275 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 C8orf33Q9H7E9 229 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 LTB4R2Q9NPC1 389 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 TAS2R14Q9NYV8 317 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 TBC1D14Q9P2M4 693 aa17.96■□□□□ 0.47
COMMD4-220ENST00000567720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.96■□□□□ 0.47
COMMD4-220ENST00000567720 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 GOLGA8SH3BPF8 625 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 CAPN9O14815 690 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 IRAK2O43187 625 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 GLULP15104 373 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 MLLT6P55198 1093 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 GSCP56915 257 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 NNTQ13423 1086 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 DHCR24Q15392 516 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 TDRD12Q587J7 1177 aaKnown RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 TRNP1Q6NT89 227 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 RALGPS2Q86X27 583 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 PHF13Q86YI8 300 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 CCDC105Q8IYK2 499 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 ZNF687Q8N1G0 1237 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 SHDQ96IW2 340 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 SERPINB11Q96P15 392 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 ADAM33Q9BZ11 813 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 TRIM5Q9C035 493 aa17.95■□□□□ 0.46
COMMD4-220ENST00000567720 NUCKS1Q9H1E3 243 aaKnown RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 METTL5Q9NRN9 209 aaKnown RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 LUC7L2Q9Y383 392 aaKnown RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 MTF2Q9Y483 593 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-220ENST00000567720 DDX3XO00571 662 aaKnown RBP eCLIP17.94■□□□□ 0.463e-7■■□□□ 12.4
COMMD4-220ENST00000567720 MFAP3LO75121 409 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 PLEKP08567 350 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-220ENST00000567720 AOC1P19801 751 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 FLT3P36888 993 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 UBXN2BQ14CS0 331 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 DCAF6Q58WW2 860 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 LY6G5CQ5SRR4 150 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 RHBDF2Q6PJF5 856 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 ZNF852Q6ZMS4 543 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 DENND1CQ8IV53 801 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 ADGRG2Q8IZP9 1017 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 TMEM105Q8N8V8 129 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 P2RY11Q96G91 374 aa17.94■□□□□ 0.46
COMMD4-220ENST00000567720 FCRL2Q96LA5 508 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-220ENST00000567720 AGO1Q9UL18 857 aaKnown RBP17.94■□□□□ 0.46
COMMD4-220ENST00000567720 NDRG2Q9UN36 371 aaKnown RBP17.94■□□□□ 0.46
COMMD4-220ENST00000567720 MAN2B1O00754 1011 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 PI15O43692 258 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 GJB6O95452 261 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 TRUB2O95900 331 aaKnown RBP17.93■□□□□ 0.46
COMMD4-220ENST00000567720 ADH1CP00326 375 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 ADH5P11766 374 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 TNFAIP3P21580 790 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 ZNF75DP51815 510 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 TBX4P57082 545 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 RING1Q06587 406 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 C1QBPQ07021 282 aaKnown RBP17.93■□□□□ 0.46
COMMD4-220ENST00000567720 EIF4EBP2Q13542 120 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-220ENST00000567720 ARID5BQ14865 1188 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 PON2Q15165 354 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 ASTLQ6HA08 431 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-220ENST00000567720 TMC6Q7Z403 805 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 PHLDB2Q86SQ0 1253 aa17.93■□□□□ 0.46
COMMD4-220ENST00000567720 C12orf40Q86WS4 652 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms